Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDS5AQ29RF7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PDS5AQ29RF7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDS5AQ29RF7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDS5AQ29RF7 INTS4P1-201ENST00000438455 1935 ntBASIC21.8■■□□□ 1.08
PDS5AQ29RF7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.8■■□□□ 1.08
PDS5AQ29RF7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDS5AQ29RF7 RCN1P2-201ENST00000398357 915 ntBASIC21.8■■□□□ 1.08
PDS5AQ29RF7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDS5AQ29RF7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.8■■□□□ 1.08
PDS5AQ29RF7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.8■■□□□ 1.08
PDS5AQ29RF7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.8■■□□□ 1.08
PDS5AQ29RF7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21.8■■□□□ 1.08
PDS5AQ29RF7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.8■■□□□ 1.08
PDS5AQ29RF7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDS5AQ29RF7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
PDS5AQ29RF7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.8■■□□□ 1.08
PDS5AQ29RF7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDS5AQ29RF7 PHGDH-209ENST00000641074 1780 ntBASIC21.79■■□□□ 1.08
PDS5AQ29RF7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.79■■□□□ 1.08
PDS5AQ29RF7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDS5AQ29RF7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PDS5AQ29RF7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PDS5AQ29RF7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.79■■□□□ 1.08
PDS5AQ29RF7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDS5AQ29RF7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PDS5AQ29RF7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.79■■□□□ 1.08
PDS5AQ29RF7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDS5AQ29RF7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDS5AQ29RF7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDS5AQ29RF7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDS5AQ29RF7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDS5AQ29RF7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.79■■□□□ 1.08
PDS5AQ29RF7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.79■■□□□ 1.08
PDS5AQ29RF7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PDS5AQ29RF7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDS5AQ29RF7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDS5AQ29RF7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.79■■□□□ 1.08
PDS5AQ29RF7 AC009078.2-202ENST00000463353 338 ntBASIC21.79■■□□□ 1.08
PDS5AQ29RF7 AF238378.1-201ENST00000526806 358 ntBASIC21.79■■□□□ 1.08
PDS5AQ29RF7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PDS5AQ29RF7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC21.79■■□□□ 1.08
PDS5AQ29RF7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.79■■□□□ 1.08
PDS5AQ29RF7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.79■■□□□ 1.08
PDS5AQ29RF7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.79■■□□□ 1.08
PDS5AQ29RF7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDS5AQ29RF7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDS5AQ29RF7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.78■■□□□ 1.08
PDS5AQ29RF7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.78■■□□□ 1.08
PDS5AQ29RF7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDS5AQ29RF7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDS5AQ29RF7 AC097374.2-201ENST00000618617 1306 ntBASIC21.78■■□□□ 1.08
PDS5AQ29RF7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PDS5AQ29RF7 AC018445.3-201ENST00000624177 1945 ntBASIC21.78■■□□□ 1.08
PDS5AQ29RF7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDS5AQ29RF7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDS5AQ29RF7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PDS5AQ29RF7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.78■■□□□ 1.08
PDS5AQ29RF7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
PDS5AQ29RF7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDS5AQ29RF7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.78■■□□□ 1.08
PDS5AQ29RF7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.78■■□□□ 1.08
PDS5AQ29RF7 SLC25A6P4-201ENST00000586535 553 ntBASIC21.78■■□□□ 1.08
PDS5AQ29RF7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDS5AQ29RF7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.78■■□□□ 1.08
PDS5AQ29RF7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDS5AQ29RF7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PDS5AQ29RF7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.77■■□□□ 1.08
PDS5AQ29RF7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
PDS5AQ29RF7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDS5AQ29RF7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.77■■□□□ 1.08
PDS5AQ29RF7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDS5AQ29RF7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDS5AQ29RF7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PDS5AQ29RF7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDS5AQ29RF7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PDS5AQ29RF7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.77■■□□□ 1.08
PDS5AQ29RF7 AC087289.5-201ENST00000586076 3175 ntBASIC21.77■■□□□ 1.08
PDS5AQ29RF7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDS5AQ29RF7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDS5AQ29RF7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PDS5AQ29RF7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PDS5AQ29RF7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21.77■■□□□ 1.07
PDS5AQ29RF7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.77■■□□□ 1.07
PDS5AQ29RF7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC21.77■■□□□ 1.07
PDS5AQ29RF7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.77■■□□□ 1.07
PDS5AQ29RF7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.77■■□□□ 1.07
PDS5AQ29RF7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.07
PDS5AQ29RF7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21.77■■□□□ 1.07
PDS5AQ29RF7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.77■■□□□ 1.07
PDS5AQ29RF7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21.77■■□□□ 1.07
PDS5AQ29RF7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.77■■□□□ 1.07
PDS5AQ29RF7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDS5AQ29RF7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDS5AQ29RF7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDS5AQ29RF7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDS5AQ29RF7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PDS5AQ29RF7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.76■■□□□ 1.07
PDS5AQ29RF7 AP000974.1-201ENST00000623909 2387 ntBASIC21.76■■□□□ 1.07
PDS5AQ29RF7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms