Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
HMGXB3Q12766 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
HMGXB3Q12766 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC31.92■■■□□ 2.7
HMGXB3Q12766 KLK8-202ENST00000320838 456 ntTSL 5 BASIC31.92■■■□□ 2.7
HMGXB3Q12766 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC31.92■■■□□ 2.7
HMGXB3Q12766 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC31.92■■■□□ 2.7
HMGXB3Q12766 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
HMGXB3Q12766 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC31.92■■■□□ 2.7
HMGXB3Q12766 IGHV3-65-201ENST00000523210 341 ntBASIC31.92■■■□□ 2.7
HMGXB3Q12766 MAL2-202ENST00000531508 892 ntTSL 3 BASIC31.92■■■□□ 2.7
HMGXB3Q12766 GREM1-201ENST00000560677 623 ntTSL 4 BASIC31.92■■■□□ 2.7
HMGXB3Q12766 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC31.92■■■□□ 2.7
HMGXB3Q12766 LSM12-202ENST00000585388 942 ntTSL 3 BASIC31.92■■■□□ 2.7
HMGXB3Q12766 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC31.92■■■□□ 2.7
HMGXB3Q12766 AC010654.1-201ENST00000615722 808 ntBASIC31.92■■■□□ 2.7
HMGXB3Q12766 AC006504.4-201ENST00000592118 1568 ntBASIC31.92■■■□□ 2.7
HMGXB3Q12766 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
HMGXB3Q12766 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC31.92■■■□□ 2.7
HMGXB3Q12766 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
HMGXB3Q12766 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC31.91■■■□□ 2.7
HMGXB3Q12766 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC31.91■■■□□ 2.7
HMGXB3Q12766 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC31.91■■■□□ 2.7
HMGXB3Q12766 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC31.91■■■□□ 2.7
HMGXB3Q12766 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
HMGXB3Q12766 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC31.91■■■□□ 2.7
HMGXB3Q12766 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
HMGXB3Q12766 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
HMGXB3Q12766 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
HMGXB3Q12766 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC31.91■■■□□ 2.7
HMGXB3Q12766 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC31.91■■■□□ 2.7
HMGXB3Q12766 AC010460.3-201ENST00000511359 1579 ntBASIC31.91■■■□□ 2.7
HMGXB3Q12766 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC31.9■■■□□ 2.7
HMGXB3Q12766 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
HMGXB3Q12766 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC31.9■■■□□ 2.7
HMGXB3Q12766 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
HMGXB3Q12766 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC31.9■■■□□ 2.7
HMGXB3Q12766 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC31.9■■■□□ 2.7
HMGXB3Q12766 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC31.9■■■□□ 2.7
HMGXB3Q12766 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC31.9■■■□□ 2.7
HMGXB3Q12766 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC31.9■■■□□ 2.7
HMGXB3Q12766 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC31.9■■■□□ 2.7
HMGXB3Q12766 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
HMGXB3Q12766 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC31.9■■■□□ 2.7
HMGXB3Q12766 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC31.9■■■□□ 2.7
HMGXB3Q12766 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
HMGXB3Q12766 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
HMGXB3Q12766 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
HMGXB3Q12766 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
HMGXB3Q12766 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC31.9■■■□□ 2.7
HMGXB3Q12766 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
HMGXB3Q12766 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
HMGXB3Q12766 CEND1P1-201ENST00000451006 455 ntBASIC31.9■■■□□ 2.7
HMGXB3Q12766 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC31.9■■■□□ 2.7
HMGXB3Q12766 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC31.9■■■□□ 2.7
HMGXB3Q12766 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC31.9■■■□□ 2.7
HMGXB3Q12766 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC31.89■■■□□ 2.7
HMGXB3Q12766 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC31.89■■■□□ 2.7
HMGXB3Q12766 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC31.89■■■□□ 2.7
HMGXB3Q12766 MYLKP1-201ENST00000509077 1580 ntBASIC31.89■■■□□ 2.7
HMGXB3Q12766 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC31.89■■■□□ 2.7
HMGXB3Q12766 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
HMGXB3Q12766 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
HMGXB3Q12766 CBR1-202ENST00000399191 838 ntTSL 3 BASIC31.89■■■□□ 2.7
HMGXB3Q12766 VN2R19P-201ENST00000442399 1052 ntBASIC31.89■■■□□ 2.7
HMGXB3Q12766 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC31.89■■■□□ 2.7
HMGXB3Q12766 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC31.89■■■□□ 2.69
HMGXB3Q12766 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
HMGXB3Q12766 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
HMGXB3Q12766 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
HMGXB3Q12766 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
HMGXB3Q12766 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
HMGXB3Q12766 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC31.88■■■□□ 2.69
HMGXB3Q12766 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC31.88■■■□□ 2.69
HMGXB3Q12766 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
HMGXB3Q12766 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
HMGXB3Q12766 AC005498.2-205ENST00000593218 784 ntBASIC31.88■■■□□ 2.69
HMGXB3Q12766 AL805961.1-202ENST00000641562 540 ntBASIC31.88■■■□□ 2.69
HMGXB3Q12766 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC31.88■■■□□ 2.69
HMGXB3Q12766 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
HMGXB3Q12766 NCF1C-201ENST00000438382 1427 ntBASIC31.87■■■□□ 2.69
HMGXB3Q12766 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
HMGXB3Q12766 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
HMGXB3Q12766 ADK-206ENST00000541550 2222 ntTSL 2 BASIC31.87■■■□□ 2.69
HMGXB3Q12766 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC31.87■■■□□ 2.69
HMGXB3Q12766 PTMS-202ENST00000389462 773 ntTSL 2 BASIC31.87■■■□□ 2.69
HMGXB3Q12766 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC31.87■■■□□ 2.69
HMGXB3Q12766 CCDC74BP1-201ENST00000508880 1123 ntBASIC31.87■■■□□ 2.69
HMGXB3Q12766 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
HMGXB3Q12766 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
HMGXB3Q12766 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
HMGXB3Q12766 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC31.87■■■□□ 2.69
HMGXB3Q12766 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
HMGXB3Q12766 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
HMGXB3Q12766 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC31.86■■■□□ 2.69
HMGXB3Q12766 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
HMGXB3Q12766 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
HMGXB3Q12766 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
HMGXB3Q12766 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC31.86■■■□□ 2.69
HMGXB3Q12766 ADH5P3-201ENST00000433842 1137 ntBASIC31.86■■■□□ 2.69
HMGXB3Q12766 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC31.86■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms