Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.66■□□□□ 0.26
LTBQ06643 AC093677.2-201ENST00000600169 1863 ntBASIC16.66■□□□□ 0.26
LTBQ06643 AC010653.2-201ENST00000623505 997 ntBASIC16.66■□□□□ 0.26
LTBQ06643 AL133373.2-201ENST00000623187 2828 ntBASIC16.66■□□□□ 0.26
LTBQ06643 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.66■□□□□ 0.26
LTBQ06643 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LTBQ06643 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
LTBQ06643 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LTBQ06643 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
LTBQ06643 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.66■□□□□ 0.26
LTBQ06643 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LTBQ06643 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LTBQ06643 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LTBQ06643 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LTBQ06643 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
LTBQ06643 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.65■□□□□ 0.26
LTBQ06643 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.65■□□□□ 0.26
LTBQ06643 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LTBQ06643 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.65■□□□□ 0.26
LTBQ06643 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LTBQ06643 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LTBQ06643 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LTBQ06643 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
LTBQ06643 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LTBQ06643 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LTBQ06643 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.65■□□□□ 0.26
LTBQ06643 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LTBQ06643 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.65■□□□□ 0.26
LTBQ06643 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.65■□□□□ 0.26
LTBQ06643 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
LTBQ06643 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.65■□□□□ 0.26
LTBQ06643 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.65■□□□□ 0.26
LTBQ06643 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.65■□□□□ 0.26
LTBQ06643 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
LTBQ06643 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
LTBQ06643 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LTBQ06643 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LTBQ06643 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.65■□□□□ 0.26
LTBQ06643 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.65■□□□□ 0.26
LTBQ06643 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LTBQ06643 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.65■□□□□ 0.26
LTBQ06643 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.65■□□□□ 0.26
LTBQ06643 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
LTBQ06643 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LTBQ06643 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LTBQ06643 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.65■□□□□ 0.26
LTBQ06643 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.65■□□□□ 0.26
LTBQ06643 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.64■□□□□ 0.26
LTBQ06643 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LTBQ06643 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
LTBQ06643 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
LTBQ06643 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LTBQ06643 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LTBQ06643 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LTBQ06643 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
LTBQ06643 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LTBQ06643 HOXB1-202ENST00000577092 1414 ntBASIC16.64■□□□□ 0.25
LTBQ06643 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LTBQ06643 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LTBQ06643 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.64■□□□□ 0.25
LTBQ06643 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.64■□□□□ 0.25
LTBQ06643 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LTBQ06643 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LTBQ06643 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LTBQ06643 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.64■□□□□ 0.25
LTBQ06643 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.64■□□□□ 0.25
LTBQ06643 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LTBQ06643 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.64■□□□□ 0.25
LTBQ06643 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LTBQ06643 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LTBQ06643 AK4P3-201ENST00000418260 669 ntBASIC16.64■□□□□ 0.25
LTBQ06643 AL450487.1-201ENST00000426799 995 ntBASIC16.64■□□□□ 0.25
LTBQ06643 KRT18P23-201ENST00000435622 1283 ntBASIC16.64■□□□□ 0.25
LTBQ06643 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.64■□□□□ 0.25
LTBQ06643 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.64■□□□□ 0.25
LTBQ06643 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LTBQ06643 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LTBQ06643 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LTBQ06643 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.64■□□□□ 0.25
LTBQ06643 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LTBQ06643 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.64■□□□□ 0.25
LTBQ06643 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LTBQ06643 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.64■□□□□ 0.25
LTBQ06643 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.64■□□□□ 0.25
LTBQ06643 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LTBQ06643 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LTBQ06643 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LTBQ06643 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.64■□□□□ 0.25
LTBQ06643 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LTBQ06643 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.63■□□□□ 0.25
LTBQ06643 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LTBQ06643 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
LTBQ06643 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
LTBQ06643 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.63■□□□□ 0.25
LTBQ06643 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LTBQ06643 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LTBQ06643 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.63■□□□□ 0.25
LTBQ06643 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LTBQ06643 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.63■□□□□ 0.25
LTBQ06643 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms