Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCR4P61073 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCR4P61073 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.65■□□□□ 0.26
CXCR4P61073 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCR4P61073 AP000593.1-201ENST00000393668 712 ntBASIC16.65■□□□□ 0.26
CXCR4P61073 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CXCR4P61073 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.65■□□□□ 0.26
CXCR4P61073 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CXCR4P61073 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.65■□□□□ 0.26
CXCR4P61073 AC104771.1-201ENST00000603335 964 ntBASIC16.65■□□□□ 0.26
CXCR4P61073 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CXCR4P61073 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCR4P61073 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CXCR4P61073 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCR4P61073 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
CXCR4P61073 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.65■□□□□ 0.26
CXCR4P61073 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCR4P61073 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCR4P61073 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.65■□□□□ 0.26
CXCR4P61073 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCR4P61073 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.65■□□□□ 0.26
CXCR4P61073 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCR4P61073 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCR4P61073 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CXCR4P61073 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.64■□□□□ 0.25
CXCR4P61073 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
CXCR4P61073 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
CXCR4P61073 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CXCR4P61073 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CXCR4P61073 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CXCR4P61073 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CXCR4P61073 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CXCR4P61073 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CXCR4P61073 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CXCR4P61073 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CXCR4P61073 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.64■□□□□ 0.25
CXCR4P61073 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.64■□□□□ 0.25
CXCR4P61073 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CXCR4P61073 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CXCR4P61073 AC008403.3-201ENST00000598924 454 ntBASIC16.64■□□□□ 0.25
CXCR4P61073 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.64■□□□□ 0.25
CXCR4P61073 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CXCR4P61073 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CXCR4P61073 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CXCR4P61073 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CXCR4P61073 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CXCR4P61073 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.64■□□□□ 0.25
CXCR4P61073 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CXCR4P61073 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.63■□□□□ 0.25
CXCR4P61073 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CXCR4P61073 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CXCR4P61073 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CXCR4P61073 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.63■□□□□ 0.25
CXCR4P61073 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.63■□□□□ 0.25
CXCR4P61073 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CXCR4P61073 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CXCR4P61073 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.63■□□□□ 0.25
CXCR4P61073 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CXCR4P61073 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CXCR4P61073 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CXCR4P61073 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.63■□□□□ 0.25
CXCR4P61073 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.63■□□□□ 0.25
CXCR4P61073 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CXCR4P61073 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CXCR4P61073 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CXCR4P61073 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CXCR4P61073 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CXCR4P61073 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CXCR4P61073 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CXCR4P61073 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CXCR4P61073 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CXCR4P61073 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.63■□□□□ 0.25
CXCR4P61073 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CXCR4P61073 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CXCR4P61073 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CXCR4P61073 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXCR4P61073 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXCR4P61073 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.62■□□□□ 0.25
CXCR4P61073 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXCR4P61073 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXCR4P61073 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXCR4P61073 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXCR4P61073 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXCR4P61073 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXCR4P61073 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.62■□□□□ 0.25
CXCR4P61073 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXCR4P61073 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXCR4P61073 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXCR4P61073 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXCR4P61073 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CXCR4P61073 KRT17P3-201ENST00000420566 1262 ntBASIC16.62■□□□□ 0.25
CXCR4P61073 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXCR4P61073 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.62■□□□□ 0.25
CXCR4P61073 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXCR4P61073 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.62■□□□□ 0.25
CXCR4P61073 Z85996.1-201ENST00000494644 937 ntBASIC16.62■□□□□ 0.25
CXCR4P61073 PRSS44-201ENST00000515154 1146 ntBASIC16.62■□□□□ 0.25
CXCR4P61073 MTDHP1-201ENST00000605323 784 ntBASIC16.62■□□□□ 0.25
CXCR4P61073 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CXCR4P61073 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms