Protein–RNA interactions for Protein: P60510

PPP4C, Serine/threonine-protein phosphatase 4 catalytic subunit, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4CP60510 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21.53■■□□□ 1.04
PPP4CP60510 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.53■■□□□ 1.04
PPP4CP60510 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.53■■□□□ 1.04
PPP4CP60510 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.53■■□□□ 1.04
PPP4CP60510 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4CP60510 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4CP60510 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4CP60510 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.53■■□□□ 1.04
PPP4CP60510 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4CP60510 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4CP60510 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PPP4CP60510 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.53■■□□□ 1.04
PPP4CP60510 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.53■■□□□ 1.04
PPP4CP60510 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4CP60510 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.53■■□□□ 1.04
PPP4CP60510 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4CP60510 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4CP60510 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4CP60510 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4CP60510 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4CP60510 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4CP60510 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4CP60510 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.53■■□□□ 1.04
PPP4CP60510 AC018445.3-201ENST00000624177 1945 ntBASIC21.53■■□□□ 1.04
PPP4CP60510 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.53■■□□□ 1.04
PPP4CP60510 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.53■■□□□ 1.04
PPP4CP60510 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PPP4CP60510 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PPP4CP60510 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.52■■□□□ 1.04
PPP4CP60510 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PPP4CP60510 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PPP4CP60510 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PPP4CP60510 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PPP4CP60510 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PPP4CP60510 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21.52■■□□□ 1.04
PPP4CP60510 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PPP4CP60510 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
PPP4CP60510 SLC25A6P4-201ENST00000586535 553 ntBASIC21.52■■□□□ 1.04
PPP4CP60510 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.52■■□□□ 1.04
PPP4CP60510 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PPP4CP60510 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC21.52■■□□□ 1.04
PPP4CP60510 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PPP4CP60510 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
PPP4CP60510 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PPP4CP60510 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PPP4CP60510 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PPP4CP60510 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.03
PPP4CP60510 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4CP60510 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4CP60510 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.51■■□□□ 1.03
PPP4CP60510 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4CP60510 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4CP60510 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.51■■□□□ 1.03
PPP4CP60510 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4CP60510 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.51■■□□□ 1.03
PPP4CP60510 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.51■■□□□ 1.03
PPP4CP60510 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4CP60510 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4CP60510 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4CP60510 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4CP60510 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4CP60510 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.51■■□□□ 1.03
PPP4CP60510 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.51■■□□□ 1.03
PPP4CP60510 DUTP2-201ENST00000519164 463 ntBASIC21.51■■□□□ 1.03
PPP4CP60510 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.51■■□□□ 1.03
PPP4CP60510 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21.51■■□□□ 1.03
PPP4CP60510 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.51■■□□□ 1.03
PPP4CP60510 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.51■■□□□ 1.03
PPP4CP60510 COX5A-204ENST00000567270 579 ntTSL 3 BASIC21.51■■□□□ 1.03
PPP4CP60510 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4CP60510 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4CP60510 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4CP60510 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4CP60510 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.51■■□□□ 1.03
PPP4CP60510 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.51■■□□□ 1.03
PPP4CP60510 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4CP60510 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4CP60510 AC097374.2-201ENST00000618617 1306 ntBASIC21.51■■□□□ 1.03
PPP4CP60510 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.51■■□□□ 1.03
PPP4CP60510 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PPP4CP60510 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4CP60510 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4CP60510 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4CP60510 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.51■■□□□ 1.03
PPP4CP60510 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PPP4CP60510 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.51■■□□□ 1.03
PPP4CP60510 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4CP60510 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4CP60510 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4CP60510 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4CP60510 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.5■■□□□ 1.03
PPP4CP60510 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4CP60510 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4CP60510 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4CP60510 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4CP60510 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4CP60510 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4CP60510 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4CP60510 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PPP4CP60510 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms