Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB38P57729 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB38P57729 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB38P57729 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB38P57729 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB38P57729 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB38P57729 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.14■□□□□ 0.33
RAB38P57729 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB38P57729 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB38P57729 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB38P57729 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB38P57729 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB38P57729 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.14■□□□□ 0.33
RAB38P57729 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
RAB38P57729 GPR32P1-201ENST00000601788 811 ntBASIC17.14■□□□□ 0.33
RAB38P57729 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB38P57729 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB38P57729 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB38P57729 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB38P57729 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB38P57729 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RAB38P57729 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RAB38P57729 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB38P57729 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB38P57729 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB38P57729 AC093010.1-201ENST00000473625 1624 ntBASIC17.14■□□□□ 0.33
RAB38P57729 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB38P57729 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
RAB38P57729 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB38P57729 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB38P57729 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB38P57729 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB38P57729 BICD1-207ENST00000551848 1962 ntBASIC17.13■□□□□ 0.33
RAB38P57729 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB38P57729 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB38P57729 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB38P57729 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.13■□□□□ 0.33
RAB38P57729 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB38P57729 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB38P57729 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RAB38P57729 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB38P57729 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.13■□□□□ 0.33
RAB38P57729 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB38P57729 PCED1CP-201ENST00000419887 785 ntBASIC17.13■□□□□ 0.33
RAB38P57729 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.13■□□□□ 0.33
RAB38P57729 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB38P57729 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB38P57729 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.13■□□□□ 0.33
RAB38P57729 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB38P57729 AC005332.3-201ENST00000589904 676 ntBASIC17.13■□□□□ 0.33
RAB38P57729 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.13■□□□□ 0.33
RAB38P57729 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.13■□□□□ 0.33
RAB38P57729 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.13■□□□□ 0.33
RAB38P57729 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB38P57729 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB38P57729 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB38P57729 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.13■□□□□ 0.33
RAB38P57729 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB38P57729 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
RAB38P57729 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB38P57729 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB38P57729 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB38P57729 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.12■□□□□ 0.33
RAB38P57729 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB38P57729 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB38P57729 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB38P57729 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB38P57729 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB38P57729 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB38P57729 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
RAB38P57729 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB38P57729 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB38P57729 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB38P57729 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB38P57729 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB38P57729 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB38P57729 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB38P57729 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RAB38P57729 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB38P57729 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.12■□□□□ 0.33
RAB38P57729 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.12■□□□□ 0.33
RAB38P57729 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.12■□□□□ 0.33
RAB38P57729 RNF126P1-202ENST00000569893 925 ntBASIC17.12■□□□□ 0.33
RAB38P57729 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB38P57729 AL390719.2-201ENST00000606993 987 ntBASIC17.12■□□□□ 0.33
RAB38P57729 AC004263.2-201ENST00000617183 678 ntBASIC17.12■□□□□ 0.33
RAB38P57729 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB38P57729 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.12■□□□□ 0.33
RAB38P57729 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB38P57729 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB38P57729 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RAB38P57729 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB38P57729 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RAB38P57729 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB38P57729 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.12■□□□□ 0.33
RAB38P57729 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB38P57729 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB38P57729 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB38P57729 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB38P57729 AL096828.2-201ENST00000567259 1965 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms