Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC096733.2-201ENST00000609937 1394 ntBASIC17.03■□□□□ 0.32
CDH12P55289 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH12P55289 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH12P55289 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH12P55289 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH12P55289 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH12P55289 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH12P55289 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH12P55289 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH12P55289 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH12P55289 FLJ13224-201ENST00000313737 1514 ntBASIC17.03■□□□□ 0.32
CDH12P55289 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH12P55289 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH12P55289 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH12P55289 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH12P55289 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CDH12P55289 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH12P55289 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH12P55289 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH12P55289 SLC25A1P4-201ENST00000567977 778 ntBASIC17.03■□□□□ 0.32
CDH12P55289 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH12P55289 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CDH12P55289 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH12P55289 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH12P55289 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH12P55289 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH12P55289 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH12P55289 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH12P55289 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH12P55289 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH12P55289 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.02■□□□□ 0.32
CDH12P55289 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH12P55289 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.02■□□□□ 0.32
CDH12P55289 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH12P55289 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CDH12P55289 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH12P55289 AC139713.2-201ENST00000641328 2723 ntBASIC17.02■□□□□ 0.32
CDH12P55289 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH12P55289 AL109659.2-201ENST00000606809 1674 ntBASIC17.02■□□□□ 0.32
CDH12P55289 ABHD17AP1-201ENST00000358206 933 ntBASIC17.02■□□□□ 0.32
CDH12P55289 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH12P55289 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.02■□□□□ 0.32
CDH12P55289 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.02■□□□□ 0.32
CDH12P55289 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH12P55289 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH12P55289 MFAP1P1-201ENST00000442257 1255 ntBASIC17.02■□□□□ 0.32
CDH12P55289 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH12P55289 KRT18P41-201ENST00000518924 1277 ntBASIC17.02■□□□□ 0.32
CDH12P55289 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH12P55289 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.02■□□□□ 0.32
CDH12P55289 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.02■□□□□ 0.32
CDH12P55289 DGCR10-201ENST00000609839 495 ntBASIC17.02■□□□□ 0.32
CDH12P55289 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.02■□□□□ 0.32
CDH12P55289 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH12P55289 AC113410.3-201ENST00000623366 203 ntBASIC17.02■□□□□ 0.32
CDH12P55289 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
CDH12P55289 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CDH12P55289 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH12P55289 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CDH12P55289 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
CDH12P55289 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH12P55289 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDH12P55289 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH12P55289 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.02■□□□□ 0.31
CDH12P55289 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH12P55289 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH12P55289 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CDH12P55289 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
CDH12P55289 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH12P55289 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH12P55289 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH12P55289 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH12P55289 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH12P55289 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH12P55289 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH12P55289 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH12P55289 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH12P55289 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH12P55289 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH12P55289 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH12P55289 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CDH12P55289 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH12P55289 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH12P55289 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH12P55289 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH12P55289 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH12P55289 AL096828.2-201ENST00000567259 1965 ntBASIC17.01■□□□□ 0.31
CDH12P55289 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH12P55289 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH12P55289 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH12P55289 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH12P55289 AC012618.2-201ENST00000428058 849 ntBASIC17.01■□□□□ 0.31
CDH12P55289 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH12P55289 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.01■□□□□ 0.31
CDH12P55289 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH12P55289 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH12P55289 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH12P55289 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH12P55289 AC233702.5-201ENST00000584107 538 ntBASIC17.01■□□□□ 0.31
CDH12P55289 AP001412.1-201ENST00000608405 714 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms