Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH6P55285 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CDH6P55285 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.01■□□□□ 0.63
CDH6P55285 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
CDH6P55285 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.01■□□□□ 0.63
CDH6P55285 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.01■□□□□ 0.63
CDH6P55285 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.01■□□□□ 0.63
CDH6P55285 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH6P55285 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH6P55285 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH6P55285 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH6P55285 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH6P55285 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH6P55285 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19■□□□□ 0.63
CDH6P55285 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH6P55285 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CDH6P55285 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CDH6P55285 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH6P55285 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19■□□□□ 0.63
CDH6P55285 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19■□□□□ 0.63
CDH6P55285 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH6P55285 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH6P55285 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH6P55285 SLC25A3P1-201ENST00000443844 931 ntBASIC19■□□□□ 0.63
CDH6P55285 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19■□□□□ 0.63
CDH6P55285 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19■□□□□ 0.63
CDH6P55285 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19■□□□□ 0.63
CDH6P55285 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH6P55285 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH6P55285 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19■□□□□ 0.63
CDH6P55285 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CDH6P55285 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH6P55285 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH6P55285 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH6P55285 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19■□□□□ 0.63
CDH6P55285 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CDH6P55285 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19■□□□□ 0.63
CDH6P55285 NOC2LP2-201ENST00000407594 1944 ntBASIC19■□□□□ 0.63
CDH6P55285 AC138028.4-201ENST00000564984 1845 ntBASIC19■□□□□ 0.63
CDH6P55285 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CDH6P55285 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH6P55285 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CDH6P55285 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CDH6P55285 LINC01126-201ENST00000623515 1646 ntBASIC19■□□□□ 0.63
CDH6P55285 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CDH6P55285 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH6P55285 AR-207ENST00000612010 3896 ntTSL 5 BASIC19■□□□□ 0.63
CDH6P55285 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CDH6P55285 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH6P55285 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH6P55285 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH6P55285 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.99■□□□□ 0.63
CDH6P55285 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH6P55285 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH6P55285 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH6P55285 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.99■□□□□ 0.63
CDH6P55285 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.99■□□□□ 0.63
CDH6P55285 AC141257.4-201ENST00000634557 245 ntBASIC18.99■□□□□ 0.63
CDH6P55285 AC136944.6-201ENST00000634818 245 ntBASIC18.99■□□□□ 0.63
CDH6P55285 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH6P55285 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH6P55285 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH6P55285 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH6P55285 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH6P55285 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH6P55285 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH6P55285 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH6P55285 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CDH6P55285 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.99■□□□□ 0.63
CDH6P55285 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH6P55285 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH6P55285 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH6P55285 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH6P55285 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH6P55285 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH6P55285 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.99■□□□□ 0.63
CDH6P55285 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH6P55285 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.98■□□□□ 0.63
CDH6P55285 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
CDH6P55285 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.98■□□□□ 0.63
CDH6P55285 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH6P55285 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.98■□□□□ 0.63
CDH6P55285 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH6P55285 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.98■□□□□ 0.63
CDH6P55285 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CDH6P55285 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH6P55285 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH6P55285 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH6P55285 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH6P55285 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH6P55285 AP000523.1-201ENST00000398242 1049 ntBASIC18.98■□□□□ 0.63
CDH6P55285 AC211429.1-201ENST00000415277 523 ntBASIC18.98■□□□□ 0.63
CDH6P55285 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH6P55285 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH6P55285 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.98■□□□□ 0.63
CDH6P55285 LINC01023-201ENST00000606054 436 ntBASIC18.98■□□□□ 0.63
CDH6P55285 AC092865.7-201ENST00000641832 219 ntBASIC18.98■□□□□ 0.63
CDH6P55285 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH6P55285 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH6P55285 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms