Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC26■■□□□ 1.75
CLTCL1P53675 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC26■■□□□ 1.75
CLTCL1P53675 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC26■■□□□ 1.75
CLTCL1P53675 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CLTCL1P53675 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC26■■□□□ 1.75
CLTCL1P53675 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CLTCL1P53675 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC25.99■■□□□ 1.75
CLTCL1P53675 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
CLTCL1P53675 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC25.99■■□□□ 1.75
CLTCL1P53675 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CLTCL1P53675 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC25.99■■□□□ 1.75
CLTCL1P53675 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CLTCL1P53675 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CLTCL1P53675 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC25.99■■□□□ 1.75
CLTCL1P53675 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
CLTCL1P53675 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CLTCL1P53675 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC25.99■■□□□ 1.75
CLTCL1P53675 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CLTCL1P53675 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CLTCL1P53675 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CLTCL1P53675 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CLTCL1P53675 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
CLTCL1P53675 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CLTCL1P53675 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CLTCL1P53675 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC25.99■■□□□ 1.75
CLTCL1P53675 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC25.99■■□□□ 1.75
CLTCL1P53675 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CLTCL1P53675 AC116407.3-201ENST00000623905 1129 ntBASIC25.99■■□□□ 1.75
CLTCL1P53675 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
CLTCL1P53675 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CLTCL1P53675 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CLTCL1P53675 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CLTCL1P53675 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CLTCL1P53675 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
CLTCL1P53675 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
CLTCL1P53675 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CLTCL1P53675 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
CLTCL1P53675 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CLTCL1P53675 RAB17-203ENST00000409576 466 ntTSL 3 BASIC25.98■■□□□ 1.75
CLTCL1P53675 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC25.98■■□□□ 1.75
CLTCL1P53675 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
CLTCL1P53675 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC25.98■■□□□ 1.75
CLTCL1P53675 PIN1-206ENST00000587625 878 ntTSL 2 BASIC25.98■■□□□ 1.75
CLTCL1P53675 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC25.98■■□□□ 1.75
CLTCL1P53675 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CLTCL1P53675 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
CLTCL1P53675 GMCL1P1-201ENST00000463439 1581 ntBASIC25.98■■□□□ 1.75
CLTCL1P53675 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CLTCL1P53675 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC25.98■■□□□ 1.75
CLTCL1P53675 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CLTCL1P53675 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC25.98■■□□□ 1.75
CLTCL1P53675 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC25.97■■□□□ 1.75
CLTCL1P53675 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC25.97■■□□□ 1.75
CLTCL1P53675 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CLTCL1P53675 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC25.97■■□□□ 1.75
CLTCL1P53675 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC25.97■■□□□ 1.75
CLTCL1P53675 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC25.97■■□□□ 1.75
CLTCL1P53675 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC25.97■■□□□ 1.75
CLTCL1P53675 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CLTCL1P53675 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC25.97■■□□□ 1.75
CLTCL1P53675 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC25.97■■□□□ 1.75
CLTCL1P53675 AC139530.3-201ENST00000620344 690 ntBASIC25.97■■□□□ 1.75
CLTCL1P53675 AC008735.5-201ENST00000623544 497 ntBASIC25.97■■□□□ 1.75
CLTCL1P53675 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC25.97■■□□□ 1.75
CLTCL1P53675 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC25.97■■□□□ 1.75
CLTCL1P53675 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CLTCL1P53675 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC25.97■■□□□ 1.75
CLTCL1P53675 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CLTCL1P53675 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC25.97■■□□□ 1.75
CLTCL1P53675 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC25.97■■□□□ 1.75
CLTCL1P53675 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC25.97■■□□□ 1.75
CLTCL1P53675 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC25.96■■□□□ 1.75
CLTCL1P53675 AL356309.3-201ENST00000624132 1934 ntBASIC25.96■■□□□ 1.75
CLTCL1P53675 KRT18P13-201ENST00000400056 1290 ntBASIC25.96■■□□□ 1.75
CLTCL1P53675 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC25.96■■□□□ 1.75
CLTCL1P53675 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC25.96■■□□□ 1.75
CLTCL1P53675 RPL13AP23-201ENST00000480739 586 ntBASIC25.96■■□□□ 1.75
CLTCL1P53675 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC25.96■■□□□ 1.75
CLTCL1P53675 OR7E14P-202ENST00000530490 1290 ntBASIC25.96■■□□□ 1.75
CLTCL1P53675 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
CLTCL1P53675 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CLTCL1P53675 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CLTCL1P53675 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CLTCL1P53675 CROCCP3-202ENST00000420820 1947 ntBASIC25.96■■□□□ 1.75
CLTCL1P53675 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CLTCL1P53675 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CLTCL1P53675 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC25.96■■□□□ 1.75
CLTCL1P53675 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CLTCL1P53675 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
CLTCL1P53675 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC25.96■■□□□ 1.75
CLTCL1P53675 RPP21-221ENST00000428040 594 ntTSL 2 BASIC25.96■■□□□ 1.75
CLTCL1P53675 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC25.96■■□□□ 1.75
CLTCL1P53675 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CLTCL1P53675 CD63-204ENST00000546939 779 ntTSL 3 BASIC25.96■■□□□ 1.75
CLTCL1P53675 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
CLTCL1P53675 RNF151-202ENST00000569210 853 ntTSL 2 BASIC25.96■■□□□ 1.75
CLTCL1P53675 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC25.96■■□□□ 1.75
CLTCL1P53675 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC25.95■■□□□ 1.75
CLTCL1P53675 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC25.95■■□□□ 1.75
CLTCL1P53675 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC25.95■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms