Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EFNA3P52797 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EFNA3P52797 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.07■□□□□ 0.32
EFNA3P52797 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.07■□□□□ 0.32
EFNA3P52797 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.07■□□□□ 0.32
EFNA3P52797 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.07■□□□□ 0.32
EFNA3P52797 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
EFNA3P52797 AC092329.2-201ENST00000598402 547 ntBASIC17.07■□□□□ 0.32
EFNA3P52797 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
EFNA3P52797 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EFNA3P52797 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EFNA3P52797 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EFNA3P52797 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
EFNA3P52797 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
EFNA3P52797 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EFNA3P52797 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
EFNA3P52797 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFNA3P52797 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFNA3P52797 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFNA3P52797 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
EFNA3P52797 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EFNA3P52797 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.06■□□□□ 0.32
EFNA3P52797 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.06■□□□□ 0.32
EFNA3P52797 DRAXINP1-201ENST00000437611 948 ntBASIC17.06■□□□□ 0.32
EFNA3P52797 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EFNA3P52797 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.06■□□□□ 0.32
EFNA3P52797 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.06■□□□□ 0.32
EFNA3P52797 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
EFNA3P52797 AP005901.3-202ENST00000581653 237 ntBASIC17.06■□□□□ 0.32
EFNA3P52797 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFNA3P52797 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.06■□□□□ 0.32
EFNA3P52797 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
EFNA3P52797 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFNA3P52797 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFNA3P52797 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
EFNA3P52797 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EFNA3P52797 ESPNP-201ENST00000270691 2015 ntBASIC17.06■□□□□ 0.32
EFNA3P52797 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.06■□□□□ 0.32
EFNA3P52797 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.06■□□□□ 0.32
EFNA3P52797 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
EFNA3P52797 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
EFNA3P52797 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFNA3P52797 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
EFNA3P52797 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFNA3P52797 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFNA3P52797 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFNA3P52797 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
EFNA3P52797 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.05■□□□□ 0.32
EFNA3P52797 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFNA3P52797 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFNA3P52797 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
EFNA3P52797 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.05■□□□□ 0.32
EFNA3P52797 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.05■□□□□ 0.32
EFNA3P52797 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFNA3P52797 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFNA3P52797 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
EFNA3P52797 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
EFNA3P52797 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
EFNA3P52797 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
EFNA3P52797 AL592071.1-201ENST00000611956 408 ntBASIC17.05■□□□□ 0.32
EFNA3P52797 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.05■□□□□ 0.32
EFNA3P52797 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.05■□□□□ 0.32
EFNA3P52797 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.05■□□□□ 0.32
EFNA3P52797 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFNA3P52797 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
EFNA3P52797 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
EFNA3P52797 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
EFNA3P52797 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
EFNA3P52797 AC073592.3-201ENST00000625118 1834 ntBASIC17.05■□□□□ 0.32
EFNA3P52797 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFNA3P52797 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EFNA3P52797 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EFNA3P52797 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EFNA3P52797 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EFNA3P52797 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
EFNA3P52797 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.04■□□□□ 0.32
EFNA3P52797 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EFNA3P52797 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EFNA3P52797 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EFNA3P52797 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.04■□□□□ 0.32
EFNA3P52797 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
EFNA3P52797 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
EFNA3P52797 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EFNA3P52797 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EFNA3P52797 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EFNA3P52797 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
EFNA3P52797 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.04■□□□□ 0.32
EFNA3P52797 TOB2P1-201ENST00000469761 992 ntBASIC17.04■□□□□ 0.32
EFNA3P52797 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.04■□□□□ 0.32
EFNA3P52797 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
EFNA3P52797 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.04■□□□□ 0.32
EFNA3P52797 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.04■□□□□ 0.32
EFNA3P52797 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
EFNA3P52797 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
EFNA3P52797 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.04■□□□□ 0.32
EFNA3P52797 LINC00167-201ENST00000530583 1419 ntBASIC17.04■□□□□ 0.32
EFNA3P52797 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.04■□□□□ 0.32
EFNA3P52797 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
EFNA3P52797 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EFNA3P52797 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms