Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN2P51788 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN2P51788 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN2P51788 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CLCN2P51788 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.69■□□□□ 0.42
CLCN2P51788 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CLCN2P51788 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
CLCN2P51788 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN2P51788 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN2P51788 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN2P51788 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.69■□□□□ 0.42
CLCN2P51788 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN2P51788 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN2P51788 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN2P51788 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN2P51788 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
CLCN2P51788 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN2P51788 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CLCN2P51788 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN2P51788 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN2P51788 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN2P51788 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CLCN2P51788 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN2P51788 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN2P51788 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.69■□□□□ 0.42
CLCN2P51788 AC113347.1-201ENST00000413321 391 ntBASIC17.69■□□□□ 0.42
CLCN2P51788 SLC25A3P1-201ENST00000443844 931 ntBASIC17.69■□□□□ 0.42
CLCN2P51788 ECEL1P2-202ENST00000465689 757 ntBASIC17.69■□□□□ 0.42
CLCN2P51788 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN2P51788 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN2P51788 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN2P51788 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CLCN2P51788 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN2P51788 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.69■□□□□ 0.42
CLCN2P51788 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN2P51788 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN2P51788 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN2P51788 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN2P51788 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN2P51788 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN2P51788 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN2P51788 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN2P51788 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.68■□□□□ 0.42
CLCN2P51788 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN2P51788 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CLCN2P51788 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CLCN2P51788 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CLCN2P51788 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.68■□□□□ 0.42
CLCN2P51788 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN2P51788 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN2P51788 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.68■□□□□ 0.42
CLCN2P51788 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN2P51788 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN2P51788 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
CLCN2P51788 AL137013.1-201ENST00000432946 1228 ntBASIC17.68■□□□□ 0.42
CLCN2P51788 FAM210CP-201ENST00000445714 574 ntBASIC17.68■□□□□ 0.42
CLCN2P51788 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.68■□□□□ 0.42
CLCN2P51788 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CLCN2P51788 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.68■□□□□ 0.42
CLCN2P51788 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.68■□□□□ 0.42
CLCN2P51788 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.68■□□□□ 0.42
CLCN2P51788 AC010653.2-201ENST00000623505 997 ntBASIC17.68■□□□□ 0.42
CLCN2P51788 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN2P51788 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN2P51788 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN2P51788 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN2P51788 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.68■□□□□ 0.42
CLCN2P51788 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.68■□□□□ 0.42
CLCN2P51788 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
CLCN2P51788 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN2P51788 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN2P51788 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN2P51788 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN2P51788 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.67■□□□□ 0.42
CLCN2P51788 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN2P51788 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN2P51788 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CLCN2P51788 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CLCN2P51788 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.67■□□□□ 0.42
CLCN2P51788 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN2P51788 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CLCN2P51788 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN2P51788 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN2P51788 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN2P51788 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.67■□□□□ 0.42
CLCN2P51788 LIN28AP1-201ENST00000429574 405 ntBASIC17.67■□□□□ 0.42
CLCN2P51788 KRT18P21-201ENST00000515767 1272 ntBASIC17.67■□□□□ 0.42
CLCN2P51788 AL353719.1-201ENST00000566847 864 ntBASIC17.67■□□□□ 0.42
CLCN2P51788 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
CLCN2P51788 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.67■□□□□ 0.42
CLCN2P51788 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN2P51788 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN2P51788 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN2P51788 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN2P51788 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.67■□□□□ 0.42
CLCN2P51788 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN2P51788 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN2P51788 AC008894.3-201ENST00000624324 3103 ntBASIC17.67■□□□□ 0.42
CLCN2P51788 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN2P51788 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms