Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1A1P48729 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CSNK1A1P48729 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CSNK1A1P48729 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.26■□□□□ 0.19
CSNK1A1P48729 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1A1P48729 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1A1P48729 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1A1P48729 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1A1P48729 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.26■□□□□ 0.19
CSNK1A1P48729 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CSNK1A1P48729 ABALON-201ENST00000629058 1903 ntBASIC16.26■□□□□ 0.19
CSNK1A1P48729 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1A1P48729 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1A1P48729 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.26■□□□□ 0.19
CSNK1A1P48729 BX664615.1-201ENST00000443558 458 ntBASIC16.26■□□□□ 0.19
CSNK1A1P48729 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.26■□□□□ 0.19
CSNK1A1P48729 AC034232.1-201ENST00000506026 1064 ntBASIC16.26■□□□□ 0.19
CSNK1A1P48729 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.26■□□□□ 0.19
CSNK1A1P48729 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.26■□□□□ 0.19
CSNK1A1P48729 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1A1P48729 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1A1P48729 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.26■□□□□ 0.19
CSNK1A1P48729 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1A1P48729 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1A1P48729 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1A1P48729 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.26■□□□□ 0.19
CSNK1A1P48729 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1A1P48729 ESPNP-201ENST00000270691 2015 ntBASIC16.26■□□□□ 0.19
CSNK1A1P48729 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.26■□□□□ 0.19
CSNK1A1P48729 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1A1P48729 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1A1P48729 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1A1P48729 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSNK1A1P48729 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CSNK1A1P48729 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1A1P48729 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
CSNK1A1P48729 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.25■□□□□ 0.19
CSNK1A1P48729 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1A1P48729 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CSNK1A1P48729 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1A1P48729 AC135776.1-201ENST00000319817 2481 ntBASIC16.25■□□□□ 0.19
CSNK1A1P48729 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
CSNK1A1P48729 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.25■□□□□ 0.19
CSNK1A1P48729 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1A1P48729 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1A1P48729 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1A1P48729 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.25■□□□□ 0.19
CSNK1A1P48729 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1A1P48729 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CSNK1A1P48729 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CSNK1A1P48729 KRT18P57-201ENST00000443599 1254 ntBASIC16.25■□□□□ 0.19
CSNK1A1P48729 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.25■□□□□ 0.19
CSNK1A1P48729 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.25■□□□□ 0.19
CSNK1A1P48729 GCSHP2-201ENST00000560971 527 ntBASIC16.25■□□□□ 0.19
CSNK1A1P48729 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CSNK1A1P48729 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1A1P48729 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1A1P48729 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.25■□□□□ 0.19
CSNK1A1P48729 AL390961.4-201ENST00000623958 2535 ntBASIC16.25■□□□□ 0.19
CSNK1A1P48729 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1A1P48729 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1A1P48729 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CSNK1A1P48729 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1A1P48729 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1A1P48729 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.25■□□□□ 0.19
CSNK1A1P48729 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSNK1A1P48729 AL354751.1-201ENST00000412768 1863 ntBASIC16.25■□□□□ 0.19
CSNK1A1P48729 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSNK1A1P48729 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CSNK1A1P48729 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSNK1A1P48729 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSNK1A1P48729 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSNK1A1P48729 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.24■□□□□ 0.19
CSNK1A1P48729 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSNK1A1P48729 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CSNK1A1P48729 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSNK1A1P48729 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.24■□□□□ 0.19
CSNK1A1P48729 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSNK1A1P48729 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSNK1A1P48729 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSNK1A1P48729 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSNK1A1P48729 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.24■□□□□ 0.19
CSNK1A1P48729 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSNK1A1P48729 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSNK1A1P48729 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSNK1A1P48729 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CSNK1A1P48729 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSNK1A1P48729 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CSNK1A1P48729 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.24■□□□□ 0.19
CSNK1A1P48729 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.24■□□□□ 0.19
CSNK1A1P48729 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.24■□□□□ 0.19
CSNK1A1P48729 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.24■□□□□ 0.19
CSNK1A1P48729 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CSNK1A1P48729 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CSNK1A1P48729 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.24■□□□□ 0.19
CSNK1A1P48729 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CSNK1A1P48729 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSNK1A1P48729 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.24■□□□□ 0.19
CSNK1A1P48729 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSNK1A1P48729 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms