Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC1A3P43003 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC1A3P43003 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC1A3P43003 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC1A3P43003 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC1A3P43003 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.8■□□□□ 0.28
SLC1A3P43003 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC1A3P43003 AC145285.6-201ENST00000604632 637 ntBASIC16.8■□□□□ 0.28
SLC1A3P43003 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A3P43003 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A3P43003 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC1A3P43003 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A3P43003 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A3P43003 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC1A3P43003 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SLC1A3P43003 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SLC1A3P43003 AL163051.1-201ENST00000569214 1512 ntBASIC16.8■□□□□ 0.28
SLC1A3P43003 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC1A3P43003 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
SLC1A3P43003 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC1A3P43003 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC1A3P43003 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A3P43003 BCL2-203ENST00000589955 5011 ntBASIC16.79■□□□□ 0.28
SLC1A3P43003 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A3P43003 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A3P43003 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC1A3P43003 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC1A3P43003 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A3P43003 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A3P43003 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
SLC1A3P43003 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A3P43003 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A3P43003 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SLC1A3P43003 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A3P43003 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A3P43003 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.79■□□□□ 0.28
SLC1A3P43003 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A3P43003 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A3P43003 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.79■□□□□ 0.28
SLC1A3P43003 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.79■□□□□ 0.28
SLC1A3P43003 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC1A3P43003 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A3P43003 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A3P43003 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A3P43003 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SLC1A3P43003 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A3P43003 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A3P43003 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A3P43003 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
SLC1A3P43003 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A3P43003 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SLC1A3P43003 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A3P43003 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC1A3P43003 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A3P43003 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A3P43003 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SLC1A3P43003 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A3P43003 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A3P43003 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.78■□□□□ 0.28
SLC1A3P43003 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A3P43003 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
SLC1A3P43003 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC1A3P43003 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A3P43003 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC1A3P43003 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC1A3P43003 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC1A3P43003 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A3P43003 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC1A3P43003 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC1A3P43003 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC1A3P43003 AC104390.1-201ENST00000555663 520 ntBASIC16.78■□□□□ 0.28
SLC1A3P43003 AC009065.1-201ENST00000564055 1225 ntBASIC16.78■□□□□ 0.28
SLC1A3P43003 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC1A3P43003 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC1A3P43003 MIR3180-4-201ENST00000582223 153 ntBASIC16.78■□□□□ 0.28
SLC1A3P43003 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC1A3P43003 AC073912.3-201ENST00000624414 853 ntBASIC16.78■□□□□ 0.28
SLC1A3P43003 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC1A3P43003 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A3P43003 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A3P43003 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC1A3P43003 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC1A3P43003 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
SLC1A3P43003 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
SLC1A3P43003 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC1A3P43003 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A3P43003 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A3P43003 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC1A3P43003 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC1A3P43003 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC1A3P43003 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A3P43003 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A3P43003 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A3P43003 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A3P43003 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC1A3P43003 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A3P43003 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A3P43003 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SLC1A3P43003 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A3P43003 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms