Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CEACAM3P40198 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CEACAM3P40198 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
CEACAM3P40198 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CEACAM3P40198 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CEACAM3P40198 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.9□□□□□ -0.02
CEACAM3P40198 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
CEACAM3P40198 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CEACAM3P40198 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CEACAM3P40198 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CEACAM3P40198 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CEACAM3P40198 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CEACAM3P40198 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CEACAM3P40198 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.9□□□□□ -0.02
CEACAM3P40198 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
CEACAM3P40198 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CEACAM3P40198 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CEACAM3P40198 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CEACAM3P40198 PVRIG2P-201ENST00000435460 978 ntBASIC14.9□□□□□ -0.02
CEACAM3P40198 DUX4L26-201ENST00000489078 1255 ntBASIC14.9□□□□□ -0.02
CEACAM3P40198 AC063952.2-201ENST00000498792 1227 ntBASIC14.9□□□□□ -0.02
CEACAM3P40198 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CEACAM3P40198 AC022616.7-201ENST00000525383 220 ntBASIC14.9□□□□□ -0.02
CEACAM3P40198 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.9□□□□□ -0.02
CEACAM3P40198 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CEACAM3P40198 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CEACAM3P40198 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CEACAM3P40198 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CEACAM3P40198 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CEACAM3P40198 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CEACAM3P40198 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CEACAM3P40198 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CEACAM3P40198 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CEACAM3P40198 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CEACAM3P40198 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CEACAM3P40198 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.9□□□□□ -0.02
CEACAM3P40198 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CEACAM3P40198 GMCL1P1-201ENST00000463439 1581 ntBASIC14.9□□□□□ -0.02
CEACAM3P40198 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CEACAM3P40198 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CEACAM3P40198 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CEACAM3P40198 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CEACAM3P40198 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CEACAM3P40198 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CEACAM3P40198 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CEACAM3P40198 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CEACAM3P40198 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CEACAM3P40198 AC104076.2-201ENST00000448912 469 ntBASIC14.89□□□□□ -0.03
CEACAM3P40198 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.89□□□□□ -0.03
CEACAM3P40198 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CEACAM3P40198 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.89□□□□□ -0.03
CEACAM3P40198 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.89□□□□□ -0.03
CEACAM3P40198 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.89□□□□□ -0.03
CEACAM3P40198 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.89□□□□□ -0.03
CEACAM3P40198 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CEACAM3P40198 AL157888.1-201ENST00000631930 593 ntBASIC14.89□□□□□ -0.03
CEACAM3P40198 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CEACAM3P40198 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CEACAM3P40198 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CEACAM3P40198 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.89□□□□□ -0.03
CEACAM3P40198 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CEACAM3P40198 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.89□□□□□ -0.03
CEACAM3P40198 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CEACAM3P40198 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CEACAM3P40198 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CEACAM3P40198 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CEACAM3P40198 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CEACAM3P40198 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CEACAM3P40198 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CEACAM3P40198 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
CEACAM3P40198 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CEACAM3P40198 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CEACAM3P40198 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CEACAM3P40198 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.89□□□□□ -0.03
CEACAM3P40198 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
CEACAM3P40198 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CEACAM3P40198 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CEACAM3P40198 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.88□□□□□ -0.03
CEACAM3P40198 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CEACAM3P40198 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.88□□□□□ -0.03
CEACAM3P40198 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CEACAM3P40198 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CEACAM3P40198 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CEACAM3P40198 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CEACAM3P40198 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CEACAM3P40198 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
CEACAM3P40198 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.88□□□□□ -0.03
CEACAM3P40198 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CEACAM3P40198 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CEACAM3P40198 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CEACAM3P40198 RBM42-202ENST00000586618 771 ntTSL 3 BASIC14.88□□□□□ -0.03
CEACAM3P40198 AC090164.3-201ENST00000610780 2143 ntBASIC14.88□□□□□ -0.03
CEACAM3P40198 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CEACAM3P40198 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CEACAM3P40198 AL590326.2-201ENST00000625139 305 ntBASIC14.88□□□□□ -0.03
CEACAM3P40198 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CEACAM3P40198 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CEACAM3P40198 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CEACAM3P40198 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CEACAM3P40198 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms