Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL15A1P39059 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL15A1P39059 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC23.06■■□□□ 1.28
COL15A1P39059 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL15A1P39059 CSF3-203ENST00000394148 622 ntTSL 3 BASIC23.06■■□□□ 1.28
COL15A1P39059 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
COL15A1P39059 COX10-202ENST00000429152 875 ntTSL 2 BASIC23.06■■□□□ 1.28
COL15A1P39059 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC23.06■■□□□ 1.28
COL15A1P39059 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC23.06■■□□□ 1.28
COL15A1P39059 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC23.06■■□□□ 1.28
COL15A1P39059 SART3-203ENST00000546611 1184 ntBASIC23.06■■□□□ 1.28
COL15A1P39059 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC23.06■■□□□ 1.28
COL15A1P39059 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL15A1P39059 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC23.06■■□□□ 1.28
COL15A1P39059 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC23.06■■□□□ 1.28
COL15A1P39059 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL15A1P39059 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC23.06■■□□□ 1.28
COL15A1P39059 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC23.06■■□□□ 1.28
COL15A1P39059 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL15A1P39059 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL15A1P39059 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC23.05■■□□□ 1.28
COL15A1P39059 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
COL15A1P39059 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL15A1P39059 MTCL1P1-201ENST00000446207 792 ntBASIC23.05■■□□□ 1.28
COL15A1P39059 RBSN-204ENST00000449050 903 ntTSL 2 BASIC23.05■■□□□ 1.28
COL15A1P39059 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC23.05■■□□□ 1.28
COL15A1P39059 IGHV3-22-201ENST00000520721 359 ntBASIC23.05■■□□□ 1.28
COL15A1P39059 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL15A1P39059 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC23.05■■□□□ 1.28
COL15A1P39059 AC145285.3-201ENST00000564603 959 ntBASIC23.05■■□□□ 1.28
COL15A1P39059 COX5A-204ENST00000567270 579 ntTSL 3 BASIC23.05■■□□□ 1.28
COL15A1P39059 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
COL15A1P39059 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL15A1P39059 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC23.05■■□□□ 1.28
COL15A1P39059 CROCCP3-202ENST00000420820 1947 ntBASIC23.05■■□□□ 1.28
COL15A1P39059 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL15A1P39059 AC125634.1-201ENST00000438758 1403 ntBASIC23.05■■□□□ 1.28
COL15A1P39059 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL15A1P39059 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
COL15A1P39059 BX323043.1-201ENST00000641006 1765 ntBASIC23.05■■□□□ 1.28
COL15A1P39059 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL15A1P39059 ZNF259P1-201ENST00000407656 1365 ntBASIC23.04■■□□□ 1.28
COL15A1P39059 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL15A1P39059 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL15A1P39059 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL15A1P39059 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
COL15A1P39059 MIR940-201ENST00000401276 94 ntBASIC23.04■■□□□ 1.28
COL15A1P39059 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC23.04■■□□□ 1.28
COL15A1P39059 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC23.04■■□□□ 1.28
COL15A1P39059 AC021087.4-201ENST00000563761 564 ntBASIC23.04■■□□□ 1.28
COL15A1P39059 ANO7L1-203ENST00000602586 1720 ntBASIC23.04■■□□□ 1.28
COL15A1P39059 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
COL15A1P39059 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL15A1P39059 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC23.04■■□□□ 1.28
COL15A1P39059 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC23.04■■□□□ 1.28
COL15A1P39059 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC23.04■■□□□ 1.28
COL15A1P39059 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
COL15A1P39059 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC23.03■■□□□ 1.28
COL15A1P39059 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC23.03■■□□□ 1.28
COL15A1P39059 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL15A1P39059 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC23.03■■□□□ 1.28
COL15A1P39059 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC23.03■■□□□ 1.28
COL15A1P39059 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL15A1P39059 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC23.03■■□□□ 1.28
COL15A1P39059 AP005117.1-201ENST00000584346 1413 ntBASIC23.03■■□□□ 1.28
COL15A1P39059 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL15A1P39059 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL15A1P39059 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC23.03■■□□□ 1.28
COL15A1P39059 MYLKP1-201ENST00000509077 1580 ntBASIC23.03■■□□□ 1.28
COL15A1P39059 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL15A1P39059 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
COL15A1P39059 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL15A1P39059 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL15A1P39059 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL15A1P39059 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL15A1P39059 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL15A1P39059 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL15A1P39059 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL15A1P39059 AC092183.1-201ENST00000469884 875 ntBASIC23.02■■□□□ 1.28
COL15A1P39059 PGAM5P1-201ENST00000518923 814 ntBASIC23.02■■□□□ 1.28
COL15A1P39059 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC23.02■■□□□ 1.28
COL15A1P39059 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
COL15A1P39059 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL15A1P39059 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL15A1P39059 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC23.02■■□□□ 1.28
COL15A1P39059 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL15A1P39059 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL15A1P39059 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC23.01■■□□□ 1.27
COL15A1P39059 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL15A1P39059 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC23.01■■□□□ 1.27
COL15A1P39059 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC23.01■■□□□ 1.27
COL15A1P39059 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC23.01■■□□□ 1.27
COL15A1P39059 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC23.01■■□□□ 1.27
COL15A1P39059 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC23.01■■□□□ 1.27
COL15A1P39059 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC23.01■■□□□ 1.27
COL15A1P39059 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC23.01■■□□□ 1.27
COL15A1P39059 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL15A1P39059 ADK-206ENST00000541550 2222 ntTSL 2 BASIC23.01■■□□□ 1.27
COL15A1P39059 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL15A1P39059 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms