Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RFC1P35251 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.25■□□□□ 0.67
RFC1P35251 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.25■□□□□ 0.67
RFC1P35251 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RFC1P35251 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.25■□□□□ 0.67
RFC1P35251 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.25■□□□□ 0.67
RFC1P35251 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.25■□□□□ 0.67
RFC1P35251 PHGDH-209ENST00000641074 1780 ntBASIC19.25■□□□□ 0.67
RFC1P35251 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFC1P35251 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.25■□□□□ 0.67
RFC1P35251 AC005363.2-201ENST00000618631 242 ntBASIC19.25■□□□□ 0.67
RFC1P35251 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.25■□□□□ 0.67
RFC1P35251 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RFC1P35251 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFC1P35251 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFC1P35251 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.25■□□□□ 0.67
RFC1P35251 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFC1P35251 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFC1P35251 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFC1P35251 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RFC1P35251 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RFC1P35251 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.24■□□□□ 0.67
RFC1P35251 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
RFC1P35251 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RFC1P35251 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RFC1P35251 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFC1P35251 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFC1P35251 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RFC1P35251 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.24■□□□□ 0.67
RFC1P35251 AC113347.1-201ENST00000413321 391 ntBASIC19.24■□□□□ 0.67
RFC1P35251 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.24■□□□□ 0.67
RFC1P35251 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.24■□□□□ 0.67
RFC1P35251 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.24■□□□□ 0.67
RFC1P35251 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.24■□□□□ 0.67
RFC1P35251 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
RFC1P35251 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFC1P35251 LINC01126-201ENST00000623515 1646 ntBASIC19.24■□□□□ 0.67
RFC1P35251 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFC1P35251 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RFC1P35251 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFC1P35251 AC073508.3-201ENST00000619697 1419 ntBASIC19.24■□□□□ 0.67
RFC1P35251 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RFC1P35251 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RFC1P35251 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFC1P35251 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RFC1P35251 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RFC1P35251 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RFC1P35251 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RFC1P35251 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RFC1P35251 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFC1P35251 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
RFC1P35251 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFC1P35251 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.23■□□□□ 0.67
RFC1P35251 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RFC1P35251 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RFC1P35251 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RFC1P35251 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFC1P35251 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFC1P35251 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFC1P35251 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RFC1P35251 TERF1P1-201ENST00000311003 1181 ntBASIC19.23■□□□□ 0.67
RFC1P35251 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RFC1P35251 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RFC1P35251 LIN28AP1-201ENST00000429574 405 ntBASIC19.23■□□□□ 0.67
RFC1P35251 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.23■□□□□ 0.67
RFC1P35251 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RFC1P35251 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.23■□□□□ 0.67
RFC1P35251 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RFC1P35251 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.23■□□□□ 0.67
RFC1P35251 GCSHP2-201ENST00000560971 527 ntBASIC19.23■□□□□ 0.67
RFC1P35251 AC009065.1-201ENST00000564055 1225 ntBASIC19.23■□□□□ 0.67
RFC1P35251 MIR3917-201ENST00000580971 93 ntBASIC19.23■□□□□ 0.67
RFC1P35251 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.23■□□□□ 0.67
RFC1P35251 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.23■□□□□ 0.67
RFC1P35251 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RFC1P35251 REXO1L9P-201ENST00000604264 2108 ntBASIC19.23■□□□□ 0.67
RFC1P35251 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RFC1P35251 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RFC1P35251 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
RFC1P35251 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.23■□□□□ 0.67
RFC1P35251 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFC1P35251 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFC1P35251 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RFC1P35251 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RFC1P35251 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RFC1P35251 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFC1P35251 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.23■□□□□ 0.67
RFC1P35251 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFC1P35251 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
RFC1P35251 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFC1P35251 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFC1P35251 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RFC1P35251 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.22■□□□□ 0.67
RFC1P35251 AP000523.1-201ENST00000398242 1049 ntBASIC19.22■□□□□ 0.67
RFC1P35251 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.22■□□□□ 0.67
RFC1P35251 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.22■□□□□ 0.67
RFC1P35251 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.22■□□□□ 0.67
RFC1P35251 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.22■□□□□ 0.67
RFC1P35251 AL023973.1-201ENST00000624619 620 ntBASIC19.22■□□□□ 0.67
RFC1P35251 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms