Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AP000344.2-201ENST00000512987 629 ntBASIC25.67■■□□□ 1.7
CPS1P31327 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC25.67■■□□□ 1.7
CPS1P31327 PUS1-205ENST00000535067 838 ntTSL 3 BASIC25.67■■□□□ 1.7
CPS1P31327 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CPS1P31327 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CPS1P31327 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC25.67■■□□□ 1.7
CPS1P31327 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
CPS1P31327 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
CPS1P31327 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC25.67■■□□□ 1.7
CPS1P31327 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
CPS1P31327 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CPS1P31327 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CPS1P31327 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC25.66■■□□□ 1.7
CPS1P31327 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
CPS1P31327 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CPS1P31327 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC25.66■■□□□ 1.7
CPS1P31327 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CPS1P31327 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CPS1P31327 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CPS1P31327 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CPS1P31327 METTL26-204ENST00000397665 558 ntTSL 2 BASIC25.66■■□□□ 1.7
CPS1P31327 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC25.66■■□□□ 1.7
CPS1P31327 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC25.66■■□□□ 1.7
CPS1P31327 AC093512.1-201ENST00000617969 520 ntBASIC25.66■■□□□ 1.7
CPS1P31327 AF228730.6-201ENST00000641497 218 ntBASIC25.66■■□□□ 1.7
CPS1P31327 AC084121.3-201ENST00000641716 218 ntBASIC25.66■■□□□ 1.7
CPS1P31327 AC105233.6-201ENST00000642093 218 ntBASIC25.66■■□□□ 1.7
CPS1P31327 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CPS1P31327 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CPS1P31327 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CPS1P31327 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC25.66■■□□□ 1.7
CPS1P31327 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CPS1P31327 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
CPS1P31327 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CPS1P31327 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC25.65■■□□□ 1.7
CPS1P31327 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CPS1P31327 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CPS1P31327 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
CPS1P31327 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CPS1P31327 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC25.65■■□□□ 1.7
CPS1P31327 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CPS1P31327 CCDC74BP1-201ENST00000508880 1123 ntBASIC25.65■■□□□ 1.7
CPS1P31327 AC092865.6-201ENST00000642101 219 ntBASIC25.65■■□□□ 1.7
CPS1P31327 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC25.65■■□□□ 1.7
CPS1P31327 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CPS1P31327 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CPS1P31327 CTNS-203ENST00000399306 803 ntTSL 3 BASIC25.64■■□□□ 1.7
CPS1P31327 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CPS1P31327 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
CPS1P31327 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC25.64■■□□□ 1.7
CPS1P31327 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC25.64■■□□□ 1.7
CPS1P31327 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC25.64■■□□□ 1.7
CPS1P31327 AL513190.1-201ENST00000621254 727 ntBASIC25.64■■□□□ 1.7
CPS1P31327 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC25.64■■□□□ 1.7
CPS1P31327 AC005593.1-201ENST00000624894 515 ntBASIC25.64■■□□□ 1.7
CPS1P31327 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
CPS1P31327 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC25.64■■□□□ 1.7
CPS1P31327 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CPS1P31327 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CPS1P31327 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CPS1P31327 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC25.64■■□□□ 1.69
CPS1P31327 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC25.64■■□□□ 1.69
CPS1P31327 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CPS1P31327 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CPS1P31327 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CPS1P31327 CD99-202ENST00000381180 530 ntTSL 2 BASIC25.63■■□□□ 1.69
CPS1P31327 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC25.63■■□□□ 1.69
CPS1P31327 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC25.63■■□□□ 1.69
CPS1P31327 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CPS1P31327 LSM12-202ENST00000585388 942 ntTSL 3 BASIC25.63■■□□□ 1.69
CPS1P31327 AC006557.2-201ENST00000592985 1240 ntBASIC25.63■■□□□ 1.69
CPS1P31327 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC25.63■■□□□ 1.69
CPS1P31327 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CPS1P31327 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC25.63■■□□□ 1.69
CPS1P31327 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CPS1P31327 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CPS1P31327 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC25.63■■□□□ 1.69
CPS1P31327 AL158211.5-201ENST00000623583 2518 ntBASIC25.63■■□□□ 1.69
CPS1P31327 CD82-202ENST00000342935 967 ntTSL 5 BASIC25.63■■□□□ 1.69
CPS1P31327 AL139400.1-201ENST00000366220 510 ntBASIC25.63■■□□□ 1.69
CPS1P31327 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC25.63■■□□□ 1.69
CPS1P31327 AC068472.1-201ENST00000474589 881 ntBASIC25.63■■□□□ 1.69
CPS1P31327 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC25.63■■□□□ 1.69
CPS1P31327 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC25.63■■□□□ 1.69
CPS1P31327 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC25.63■■□□□ 1.69
CPS1P31327 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC25.63■■□□□ 1.69
CPS1P31327 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC25.62■■□□□ 1.69
CPS1P31327 AC097374.2-201ENST00000618617 1306 ntBASIC25.62■■□□□ 1.69
CPS1P31327 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CPS1P31327 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CPS1P31327 AC009102.3-201ENST00000623118 1491 ntBASIC25.62■■□□□ 1.69
CPS1P31327 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC25.62■■□□□ 1.69
CPS1P31327 SOD2-201ENST00000337404 991 ntTSL 2 BASIC25.62■■□□□ 1.69
CPS1P31327 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
CPS1P31327 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
CPS1P31327 AC007274.1-201ENST00000439805 662 ntBASIC25.62■■□□□ 1.69
CPS1P31327 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC25.62■■□□□ 1.69
CPS1P31327 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC25.62■■□□□ 1.69
CPS1P31327 TCAP-202ENST00000578283 583 ntTSL 5 BASIC25.62■■□□□ 1.69
CPS1P31327 AC005498.2-205ENST00000593218 784 ntBASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms