Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CCL1P22362 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL1P22362 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCL1P22362 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL1P22362 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCL1P22362 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL1P22362 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL1P22362 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.71■□□□□ 0.11
CCL1P22362 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.71■□□□□ 0.11
CCL1P22362 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL1P22362 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CCL1P22362 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCL1P22362 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL1P22362 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL1P22362 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.71■□□□□ 0.11
CCL1P22362 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL1P22362 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCL1P22362 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
CCL1P22362 AC128688.1-201ENST00000487626 519 ntBASIC15.71■□□□□ 0.11
CCL1P22362 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.71■□□□□ 0.11
CCL1P22362 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.71■□□□□ 0.11
CCL1P22362 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCL1P22362 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.71■□□□□ 0.11
CCL1P22362 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCL1P22362 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL1P22362 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CCL1P22362 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.71■□□□□ 0.11
CCL1P22362 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
CCL1P22362 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCL1P22362 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL1P22362 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL1P22362 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCL1P22362 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCL1P22362 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL1P22362 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL1P22362 AC012317.2-201ENST00000623305 2251 ntBASIC15.7■□□□□ 0.1
CCL1P22362 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.7■□□□□ 0.1
CCL1P22362 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL1P22362 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL1P22362 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL1P22362 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL1P22362 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL1P22362 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL1P22362 INGX-201ENST00000359239 846 ntBASIC15.7■□□□□ 0.1
CCL1P22362 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.7■□□□□ 0.1
CCL1P22362 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL1P22362 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCL1P22362 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.7■□□□□ 0.1
CCL1P22362 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CCL1P22362 NEK4P2-201ENST00000580004 1012 ntBASIC15.7■□□□□ 0.1
CCL1P22362 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.7■□□□□ 0.1
CCL1P22362 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCL1P22362 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.7■□□□□ 0.1
CCL1P22362 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCL1P22362 AP006294.2-201ENST00000641667 209 ntBASIC15.7■□□□□ 0.1
CCL1P22362 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
CCL1P22362 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCL1P22362 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.7■□□□□ 0.1
CCL1P22362 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL1P22362 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL1P22362 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCL1P22362 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL1P22362 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCL1P22362 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL1P22362 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCL1P22362 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.69■□□□□ 0.1
CCL1P22362 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL1P22362 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.69■□□□□ 0.1
CCL1P22362 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCL1P22362 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL1P22362 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL1P22362 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL1P22362 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL1P22362 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL1P22362 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.69■□□□□ 0.1
CCL1P22362 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL1P22362 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL1P22362 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CCL1P22362 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL1P22362 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.69■□□□□ 0.1
CCL1P22362 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.69■□□□□ 0.1
CCL1P22362 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCL1P22362 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.69■□□□□ 0.1
CCL1P22362 AL512604.3-201ENST00000569583 964 ntBASIC15.69■□□□□ 0.1
CCL1P22362 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.69■□□□□ 0.1
CCL1P22362 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.69■□□□□ 0.1
CCL1P22362 AC008687.5-201ENST00000593746 558 ntBASIC15.69■□□□□ 0.1
CCL1P22362 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCL1P22362 TMEM191A-211ENST00000637163 1067 ntBASIC15.69■□□□□ 0.1
CCL1P22362 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.69■□□□□ 0.1
CCL1P22362 CYP2D8P-201ENST00000433633 1490 ntBASIC15.69■□□□□ 0.1
CCL1P22362 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL1P22362 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL1P22362 AC132938.6-201ENST00000623828 1655 ntBASIC15.69■□□□□ 0.1
CCL1P22362 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL1P22362 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL1P22362 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL1P22362 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
CCL1P22362 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL1P22362 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms