Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.9■□□□□ 0.3
UBL4AP11441 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBL4AP11441 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
UBL4AP11441 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBL4AP11441 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBL4AP11441 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
UBL4AP11441 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.89■□□□□ 0.3
UBL4AP11441 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
UBL4AP11441 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
UBL4AP11441 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.89■□□□□ 0.29
UBL4AP11441 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
UBL4AP11441 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.89■□□□□ 0.29
UBL4AP11441 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBL4AP11441 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UBL4AP11441 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBL4AP11441 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBL4AP11441 AC141586.5-201ENST00000624546 2050 ntBASIC16.89■□□□□ 0.29
UBL4AP11441 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UBL4AP11441 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UBL4AP11441 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.89■□□□□ 0.29
UBL4AP11441 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.89■□□□□ 0.29
UBL4AP11441 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
UBL4AP11441 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
UBL4AP11441 MIR149-201ENST00000384879 89 ntBASIC16.89■□□□□ 0.29
UBL4AP11441 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBL4AP11441 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.89■□□□□ 0.29
UBL4AP11441 AC104390.1-201ENST00000555663 520 ntBASIC16.89■□□□□ 0.29
UBL4AP11441 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.89■□□□□ 0.29
UBL4AP11441 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
UBL4AP11441 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBL4AP11441 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
UBL4AP11441 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBL4AP11441 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.89■□□□□ 0.29
UBL4AP11441 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBL4AP11441 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBL4AP11441 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBL4AP11441 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBL4AP11441 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
UBL4AP11441 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.89■□□□□ 0.29
UBL4AP11441 AL162741.1-201ENST00000565563 1558 ntBASIC16.89■□□□□ 0.29
UBL4AP11441 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
UBL4AP11441 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
UBL4AP11441 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBL4AP11441 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.89■□□□□ 0.29
UBL4AP11441 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL4AP11441 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBL4AP11441 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL4AP11441 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL4AP11441 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBL4AP11441 AC124067.4-201ENST00000519691 2379 ntBASIC16.88■□□□□ 0.29
UBL4AP11441 AC008894.3-201ENST00000624324 3103 ntBASIC16.88■□□□□ 0.29
UBL4AP11441 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL4AP11441 PRORSD1P-202ENST00000563365 2154 ntBASIC16.88■□□□□ 0.29
UBL4AP11441 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL4AP11441 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL4AP11441 AC009102.3-201ENST00000623118 1491 ntBASIC16.88■□□□□ 0.29
UBL4AP11441 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.88■□□□□ 0.29
UBL4AP11441 BICD1-207ENST00000551848 1962 ntBASIC16.88■□□□□ 0.29
UBL4AP11441 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBL4AP11441 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL4AP11441 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
UBL4AP11441 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL4AP11441 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.88■□□□□ 0.29
UBL4AP11441 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBL4AP11441 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL4AP11441 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL4AP11441 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBL4AP11441 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL4AP11441 LIN28AP1-201ENST00000429574 405 ntBASIC16.88■□□□□ 0.29
UBL4AP11441 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
UBL4AP11441 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL4AP11441 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.88■□□□□ 0.29
UBL4AP11441 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.88■□□□□ 0.29
UBL4AP11441 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.88■□□□□ 0.29
UBL4AP11441 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.88■□□□□ 0.29
UBL4AP11441 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBL4AP11441 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL4AP11441 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL4AP11441 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL4AP11441 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.88■□□□□ 0.29
UBL4AP11441 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
UBL4AP11441 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBL4AP11441 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.88■□□□□ 0.29
UBL4AP11441 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
UBL4AP11441 HTR7P1-202ENST00000624664 4411 ntBASIC16.88■□□□□ 0.29
UBL4AP11441 AC135050.7-201ENST00000624508 2218 ntBASIC16.88■□□□□ 0.29
UBL4AP11441 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBL4AP11441 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.87■□□□□ 0.29
UBL4AP11441 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.87■□□□□ 0.29
UBL4AP11441 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
UBL4AP11441 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBL4AP11441 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBL4AP11441 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBL4AP11441 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBL4AP11441 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBL4AP11441 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBL4AP11441 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBL4AP11441 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBL4AP11441 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBL4AP11441 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms