Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FAM228BP0C875 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
FAM228BP0C875 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
FAM228BP0C875 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FAM228BP0C875 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
FAM228BP0C875 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.48■□□□□ 0.71
FAM228BP0C875 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
FAM228BP0C875 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FAM228BP0C875 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.48■□□□□ 0.71
FAM228BP0C875 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.48■□□□□ 0.71
FAM228BP0C875 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
FAM228BP0C875 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FAM228BP0C875 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
FAM228BP0C875 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.48■□□□□ 0.71
FAM228BP0C875 AC007663.1-201ENST00000438948 1240 ntBASIC19.48■□□□□ 0.71
FAM228BP0C875 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.48■□□□□ 0.71
FAM228BP0C875 FITM1-202ENST00000559294 800 ntBASIC19.48■□□□□ 0.71
FAM228BP0C875 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.48■□□□□ 0.71
FAM228BP0C875 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
FAM228BP0C875 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
FAM228BP0C875 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.48■□□□□ 0.71
FAM228BP0C875 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
FAM228BP0C875 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.48■□□□□ 0.71
FAM228BP0C875 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FAM228BP0C875 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.48■□□□□ 0.71
FAM228BP0C875 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FAM228BP0C875 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
FAM228BP0C875 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FAM228BP0C875 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FAM228BP0C875 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
FAM228BP0C875 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
FAM228BP0C875 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FAM228BP0C875 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.47■□□□□ 0.71
FAM228BP0C875 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
FAM228BP0C875 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FAM228BP0C875 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
FAM228BP0C875 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.47■□□□□ 0.71
FAM228BP0C875 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
FAM228BP0C875 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FAM228BP0C875 AC008550.1-201ENST00000511500 884 ntBASIC19.47■□□□□ 0.71
FAM228BP0C875 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.47■□□□□ 0.71
FAM228BP0C875 AC104390.1-201ENST00000555663 520 ntBASIC19.47■□□□□ 0.71
FAM228BP0C875 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.47■□□□□ 0.71
FAM228BP0C875 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
FAM228BP0C875 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FAM228BP0C875 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
FAM228BP0C875 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FAM228BP0C875 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FAM228BP0C875 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
FAM228BP0C875 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
FAM228BP0C875 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FAM228BP0C875 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FAM228BP0C875 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
FAM228BP0C875 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FAM228BP0C875 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FAM228BP0C875 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FAM228BP0C875 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
FAM228BP0C875 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FAM228BP0C875 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.46■□□□□ 0.71
FAM228BP0C875 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.46■□□□□ 0.71
FAM228BP0C875 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
FAM228BP0C875 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FAM228BP0C875 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FAM228BP0C875 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.46■□□□□ 0.71
FAM228BP0C875 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
FAM228BP0C875 BX088651.1-201ENST00000540551 451 ntBASIC19.46■□□□□ 0.71
FAM228BP0C875 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
FAM228BP0C875 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FAM228BP0C875 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FAM228BP0C875 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
FAM228BP0C875 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FAM228BP0C875 KRT18P55-202ENST00000578578 1546 ntBASIC19.46■□□□□ 0.71
FAM228BP0C875 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
FAM228BP0C875 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FAM228BP0C875 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FAM228BP0C875 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FAM228BP0C875 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FAM228BP0C875 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FAM228BP0C875 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
FAM228BP0C875 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FAM228BP0C875 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.45■□□□□ 0.7
FAM228BP0C875 CCR12P-201ENST00000446203 998 ntBASIC19.45■□□□□ 0.7
FAM228BP0C875 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
FAM228BP0C875 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FAM228BP0C875 AC112497.1-201ENST00000624824 639 ntBASIC19.45■□□□□ 0.7
FAM228BP0C875 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FAM228BP0C875 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FAM228BP0C875 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
FAM228BP0C875 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
FAM228BP0C875 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FAM228BP0C875 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.45■□□□□ 0.7
FAM228BP0C875 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
FAM228BP0C875 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.45■□□□□ 0.7
FAM228BP0C875 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FAM228BP0C875 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
FAM228BP0C875 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FAM228BP0C875 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.45■□□□□ 0.7
FAM228BP0C875 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FAM228BP0C875 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FAM228BP0C875 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms