Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
RAB40ALP0C0E4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 AL161938.1-201ENST00000569833 2180 ntBASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 IGHV3-47-201ENST00000425060 335 ntBASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 AC113404.2-201ENST00000507884 177 ntBASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.19■□□□□ 0.34
RAB40ALP0C0E4 NEFHP1-201ENST00000412845 2629 ntBASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 FDX1P1-201ENST00000449115 551 ntBASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 AC011840.4-201ENST00000578471 627 ntBASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 LINC00167-201ENST00000530583 1419 ntBASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 AC112777.1-201ENST00000540175 1423 ntBASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 AC009102.3-201ENST00000623118 1491 ntBASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB40ALP0C0E4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms