Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.8■□□□□ 0.92
TPM2P07951 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TPM2P07951 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TPM2P07951 PCDH8P1-201ENST00000428983 2773 ntBASIC20.8■□□□□ 0.92
TPM2P07951 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TPM2P07951 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TPM2P07951 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TPM2P07951 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC20.79■□□□□ 0.92
TPM2P07951 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TPM2P07951 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
TPM2P07951 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.79■□□□□ 0.92
TPM2P07951 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.79■□□□□ 0.92
TPM2P07951 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
TPM2P07951 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
TPM2P07951 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
TPM2P07951 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TPM2P07951 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.79■□□□□ 0.92
TPM2P07951 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TPM2P07951 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TPM2P07951 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TPM2P07951 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.79■□□□□ 0.92
TPM2P07951 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.79■□□□□ 0.92
TPM2P07951 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TPM2P07951 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.79■□□□□ 0.92
TPM2P07951 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.79■□□□□ 0.92
TPM2P07951 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
TPM2P07951 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.79■□□□□ 0.92
TPM2P07951 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TPM2P07951 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TPM2P07951 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TPM2P07951 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TPM2P07951 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
TPM2P07951 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TPM2P07951 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TPM2P07951 FLJ38576-201ENST00000623820 2459 ntBASIC20.79■□□□□ 0.92
TPM2P07951 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TPM2P07951 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TPM2P07951 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TPM2P07951 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.78■□□□□ 0.92
TPM2P07951 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.78■□□□□ 0.92
TPM2P07951 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.78■□□□□ 0.92
TPM2P07951 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TPM2P07951 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TPM2P07951 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC20.78■□□□□ 0.92
TPM2P07951 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.78■□□□□ 0.92
TPM2P07951 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TPM2P07951 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.78■□□□□ 0.92
TPM2P07951 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TPM2P07951 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TPM2P07951 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TPM2P07951 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.78■□□□□ 0.92
TPM2P07951 AL355802.2-201ENST00000402069 882 ntBASIC20.78■□□□□ 0.92
TPM2P07951 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TPM2P07951 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.78■□□□□ 0.92
TPM2P07951 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.78■□□□□ 0.92
TPM2P07951 AP003097.1-201ENST00000530657 1135 ntBASIC20.78■□□□□ 0.92
TPM2P07951 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TPM2P07951 AC092666.2-201ENST00000613287 246 ntBASIC20.78■□□□□ 0.92
TPM2P07951 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TPM2P07951 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TPM2P07951 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.78■□□□□ 0.92
TPM2P07951 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TPM2P07951 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TPM2P07951 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
TPM2P07951 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TPM2P07951 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TPM2P07951 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TPM2P07951 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TPM2P07951 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TPM2P07951 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.77■□□□□ 0.92
TPM2P07951 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TPM2P07951 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.77■□□□□ 0.92
TPM2P07951 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TPM2P07951 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
TPM2P07951 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TPM2P07951 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TPM2P07951 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.77■□□□□ 0.92
TPM2P07951 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TPM2P07951 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
TPM2P07951 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
TPM2P07951 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.77■□□□□ 0.92
TPM2P07951 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.77■□□□□ 0.92
TPM2P07951 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TPM2P07951 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
TPM2P07951 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC20.77■□□□□ 0.92
TPM2P07951 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TPM2P07951 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TPM2P07951 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TPM2P07951 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
TPM2P07951 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
TPM2P07951 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.77■□□□□ 0.91
TPM2P07951 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.76■□□□□ 0.91
TPM2P07951 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.76■□□□□ 0.91
TPM2P07951 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TPM2P07951 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TPM2P07951 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TPM2P07951 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TPM2P07951 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TPM2P07951 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TPM2P07951 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms