Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RB1P06400 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
RB1P06400 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.25■□□□□ 0.67
RB1P06400 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RB1P06400 MYLKP1-201ENST00000509077 1580 ntBASIC19.25■□□□□ 0.67
RB1P06400 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RB1P06400 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RB1P06400 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RB1P06400 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.25■□□□□ 0.67
RB1P06400 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.25■□□□□ 0.67
RB1P06400 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.25■□□□□ 0.67
RB1P06400 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.25■□□□□ 0.67
RB1P06400 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RB1P06400 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
RB1P06400 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.25■□□□□ 0.67
RB1P06400 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.25■□□□□ 0.67
RB1P06400 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.25■□□□□ 0.67
RB1P06400 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RB1P06400 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.25■□□□□ 0.67
RB1P06400 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RB1P06400 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RB1P06400 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.25■□□□□ 0.67
RB1P06400 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RB1P06400 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.25■□□□□ 0.67
RB1P06400 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.24■□□□□ 0.67
RB1P06400 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RB1P06400 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RB1P06400 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.24■□□□□ 0.67
RB1P06400 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RB1P06400 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RB1P06400 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RB1P06400 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RB1P06400 LAGE3P1-201ENST00000425356 484 ntBASIC19.24■□□□□ 0.67
RB1P06400 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RB1P06400 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.24■□□□□ 0.67
RB1P06400 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.24■□□□□ 0.67
RB1P06400 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.24■□□□□ 0.67
RB1P06400 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.24■□□□□ 0.67
RB1P06400 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.24■□□□□ 0.67
RB1P06400 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RB1P06400 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RB1P06400 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RB1P06400 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RB1P06400 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
RB1P06400 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RB1P06400 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
RB1P06400 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RB1P06400 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RB1P06400 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RB1P06400 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RB1P06400 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RB1P06400 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RB1P06400 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RB1P06400 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RB1P06400 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RB1P06400 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RB1P06400 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RB1P06400 LINC00602-201ENST00000629776 2065 ntBASIC19.23■□□□□ 0.67
RB1P06400 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.23■□□□□ 0.67
RB1P06400 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RB1P06400 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RB1P06400 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RB1P06400 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RB1P06400 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RB1P06400 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RB1P06400 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.23■□□□□ 0.67
RB1P06400 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RB1P06400 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RB1P06400 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RB1P06400 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RB1P06400 RPS8P6-201ENST00000426177 609 ntBASIC19.23■□□□□ 0.67
RB1P06400 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.23■□□□□ 0.67
RB1P06400 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RB1P06400 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.23■□□□□ 0.67
RB1P06400 AC002347.1-201ENST00000569543 541 ntBASIC19.23■□□□□ 0.67
RB1P06400 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.23■□□□□ 0.67
RB1P06400 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RB1P06400 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.23■□□□□ 0.67
RB1P06400 AP000867.4-201ENST00000641616 219 ntBASIC19.23■□□□□ 0.67
RB1P06400 SLC25A24-204ENST00000569674 2357 ntBASIC19.23■□□□□ 0.67
RB1P06400 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RB1P06400 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RB1P06400 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RB1P06400 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RB1P06400 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RB1P06400 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RB1P06400 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RB1P06400 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RB1P06400 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RB1P06400 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RB1P06400 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RB1P06400 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RB1P06400 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.22■□□□□ 0.67
RB1P06400 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RB1P06400 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RB1P06400 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RB1P06400 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RB1P06400 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.22■□□□□ 0.67
RB1P06400 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.22■□□□□ 0.67
RB1P06400 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms