Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.17■□□□□ 0.18
APOC1P02654 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
APOC1P02654 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.17■□□□□ 0.18
APOC1P02654 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
APOC1P02654 AC099398.1-201ENST00000567919 2776 ntBASIC16.16■□□□□ 0.18
APOC1P02654 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
APOC1P02654 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.16■□□□□ 0.18
APOC1P02654 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
APOC1P02654 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOC1P02654 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.16■□□□□ 0.18
APOC1P02654 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOC1P02654 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
APOC1P02654 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOC1P02654 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
APOC1P02654 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
APOC1P02654 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.16■□□□□ 0.18
APOC1P02654 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.16■□□□□ 0.18
APOC1P02654 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
APOC1P02654 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.16■□□□□ 0.18
APOC1P02654 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.16■□□□□ 0.18
APOC1P02654 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.16■□□□□ 0.18
APOC1P02654 AC009065.1-201ENST00000564055 1225 ntBASIC16.16■□□□□ 0.18
APOC1P02654 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.16■□□□□ 0.18
APOC1P02654 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
APOC1P02654 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.16■□□□□ 0.18
APOC1P02654 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOC1P02654 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.16■□□□□ 0.18
APOC1P02654 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.16■□□□□ 0.18
APOC1P02654 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOC1P02654 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.16■□□□□ 0.18
APOC1P02654 KRT17P2-201ENST00000300992 1314 ntBASIC16.16■□□□□ 0.18
APOC1P02654 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
APOC1P02654 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.16■□□□□ 0.18
APOC1P02654 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.16■□□□□ 0.18
APOC1P02654 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOC1P02654 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
APOC1P02654 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOC1P02654 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
APOC1P02654 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOC1P02654 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.15■□□□□ 0.18
APOC1P02654 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
APOC1P02654 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOC1P02654 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
APOC1P02654 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOC1P02654 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOC1P02654 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.15■□□□□ 0.18
APOC1P02654 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOC1P02654 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.15■□□□□ 0.18
APOC1P02654 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOC1P02654 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOC1P02654 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOC1P02654 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOC1P02654 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOC1P02654 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
APOC1P02654 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOC1P02654 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.15■□□□□ 0.18
APOC1P02654 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOC1P02654 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.15■□□□□ 0.18
APOC1P02654 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.15■□□□□ 0.18
APOC1P02654 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.15■□□□□ 0.18
APOC1P02654 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.15■□□□□ 0.18
APOC1P02654 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.15■□□□□ 0.18
APOC1P02654 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APOC1P02654 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOC1P02654 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.15■□□□□ 0.18
APOC1P02654 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APOC1P02654 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
APOC1P02654 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.15■□□□□ 0.18
APOC1P02654 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOC1P02654 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOC1P02654 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
APOC1P02654 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOC1P02654 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APOC1P02654 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOC1P02654 AC139713.2-201ENST00000641328 2723 ntBASIC16.15■□□□□ 0.18
APOC1P02654 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOC1P02654 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APOC1P02654 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
APOC1P02654 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.15■□□□□ 0.18
APOC1P02654 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
APOC1P02654 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
APOC1P02654 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APOC1P02654 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.14■□□□□ 0.17
APOC1P02654 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
APOC1P02654 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
APOC1P02654 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
APOC1P02654 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
APOC1P02654 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
APOC1P02654 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.14■□□□□ 0.17
APOC1P02654 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
APOC1P02654 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APOC1P02654 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.14■□□□□ 0.17
APOC1P02654 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.14■□□□□ 0.17
APOC1P02654 AC008550.1-201ENST00000511500 884 ntBASIC16.14■□□□□ 0.17
APOC1P02654 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.14■□□□□ 0.17
APOC1P02654 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.14■□□□□ 0.17
APOC1P02654 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.14■□□□□ 0.17
APOC1P02654 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.14■□□□□ 0.17
APOC1P02654 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APOC1P02654 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms