Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV12-3P01733 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.12□□□□□ -0.15
TRBV12-3P01733 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.12□□□□□ -0.15
TRBV12-3P01733 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.12□□□□□ -0.15
TRBV12-3P01733 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV12-3P01733 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV12-3P01733 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV12-3P01733 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV12-3P01733 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV12-3P01733 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV12-3P01733 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV12-3P01733 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRBV12-3P01733 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TRBV12-3P01733 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV12-3P01733 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.11□□□□□ -0.15
TRBV12-3P01733 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV12-3P01733 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV12-3P01733 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV12-3P01733 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV12-3P01733 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV12-3P01733 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV12-3P01733 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRBV12-3P01733 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
TRBV12-3P01733 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV12-3P01733 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV12-3P01733 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.11□□□□□ -0.15
TRBV12-3P01733 HLA-F-220ENST00000434407 884 ntBASIC14.11□□□□□ -0.15
TRBV12-3P01733 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.11□□□□□ -0.15
TRBV12-3P01733 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.11□□□□□ -0.15
TRBV12-3P01733 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.11□□□□□ -0.15
TRBV12-3P01733 AC087388.1-201ENST00000571370 1112 ntBASIC14.11□□□□□ -0.15
TRBV12-3P01733 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.11□□□□□ -0.15
TRBV12-3P01733 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
TRBV12-3P01733 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.11□□□□□ -0.15
TRBV12-3P01733 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV12-3P01733 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV12-3P01733 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV12-3P01733 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRBV12-3P01733 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV12-3P01733 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV12-3P01733 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV12-3P01733 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV12-3P01733 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV12-3P01733 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV12-3P01733 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.11□□□□□ -0.15
TRBV12-3P01733 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRBV12-3P01733 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV12-3P01733 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.11□□□□□ -0.15
TRBV12-3P01733 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV12-3P01733 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV12-3P01733 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV12-3P01733 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV12-3P01733 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV12-3P01733 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV12-3P01733 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.1□□□□□ -0.15
TRBV12-3P01733 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV12-3P01733 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV12-3P01733 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV12-3P01733 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
TRBV12-3P01733 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
TRBV12-3P01733 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV12-3P01733 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV12-3P01733 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV12-3P01733 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.1□□□□□ -0.15
TRBV12-3P01733 AL031133.1-201ENST00000406807 723 ntBASIC14.1□□□□□ -0.15
TRBV12-3P01733 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TRBV12-3P01733 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV12-3P01733 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV12-3P01733 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.1□□□□□ -0.15
TRBV12-3P01733 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.1□□□□□ -0.15
TRBV12-3P01733 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV12-3P01733 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV12-3P01733 AC007613.1-201ENST00000572811 2597 ntBASIC14.1□□□□□ -0.15
TRBV12-3P01733 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV12-3P01733 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV12-3P01733 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRBV12-3P01733 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV12-3P01733 AC093677.2-201ENST00000600169 1863 ntBASIC14.1□□□□□ -0.15
TRBV12-3P01733 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.1□□□□□ -0.15
TRBV12-3P01733 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.1□□□□□ -0.15
TRBV12-3P01733 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.09□□□□□ -0.15
TRBV12-3P01733 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TRBV12-3P01733 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRBV12-3P01733 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV12-3P01733 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TRBV12-3P01733 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV12-3P01733 PHGDH-209ENST00000641074 1780 ntBASIC14.09□□□□□ -0.15
TRBV12-3P01733 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV12-3P01733 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.09□□□□□ -0.15
TRBV12-3P01733 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TRBV12-3P01733 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV12-3P01733 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV12-3P01733 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV12-3P01733 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV12-3P01733 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV12-3P01733 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.09□□□□□ -0.15
TRBV12-3P01733 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.09□□□□□ -0.15
TRBV12-3P01733 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TRBV12-3P01733 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV12-3P01733 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms