Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
MBD3O95983 AC091390.4-202ENST00000476426 537 ntBASIC20.95■□□□□ 0.94
MBD3O95983 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.95■□□□□ 0.94
MBD3O95983 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MBD3O95983 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.95■□□□□ 0.94
MBD3O95983 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.95■□□□□ 0.94
MBD3O95983 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
MBD3O95983 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.95■□□□□ 0.94
MBD3O95983 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD3O95983 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD3O95983 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.95■□□□□ 0.94
MBD3O95983 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MBD3O95983 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD3O95983 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD3O95983 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MBD3O95983 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD3O95983 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD3O95983 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MBD3O95983 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
MBD3O95983 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MBD3O95983 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MBD3O95983 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.94■□□□□ 0.94
MBD3O95983 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
MBD3O95983 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MBD3O95983 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
MBD3O95983 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MBD3O95983 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.94■□□□□ 0.94
MBD3O95983 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.94■□□□□ 0.94
MBD3O95983 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MBD3O95983 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.94■□□□□ 0.94
MBD3O95983 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.94■□□□□ 0.94
MBD3O95983 CKBP1-201ENST00000565489 1086 ntBASIC20.94■□□□□ 0.94
MBD3O95983 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MBD3O95983 MIR5787-201ENST00000611784 55 ntBASIC20.94■□□□□ 0.94
MBD3O95983 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MBD3O95983 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.94■□□□□ 0.94
MBD3O95983 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
MBD3O95983 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MBD3O95983 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MBD3O95983 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MBD3O95983 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MBD3O95983 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.94■□□□□ 0.94
MBD3O95983 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.94■□□□□ 0.94
MBD3O95983 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MBD3O95983 AC011676.5-201ENST00000624864 2660 ntBASIC20.93■□□□□ 0.94
MBD3O95983 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD3O95983 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD3O95983 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MBD3O95983 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD3O95983 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.93■□□□□ 0.94
MBD3O95983 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.93■□□□□ 0.94
MBD3O95983 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
MBD3O95983 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC20.93■□□□□ 0.94
MBD3O95983 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.93■□□□□ 0.94
MBD3O95983 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.93■□□□□ 0.94
MBD3O95983 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.93■□□□□ 0.94
MBD3O95983 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.93■□□□□ 0.94
MBD3O95983 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.93■□□□□ 0.94
MBD3O95983 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD3O95983 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD3O95983 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MBD3O95983 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD3O95983 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.93■□□□□ 0.94
MBD3O95983 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD3O95983 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MBD3O95983 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD3O95983 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD3O95983 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MBD3O95983 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
MBD3O95983 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MBD3O95983 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD3O95983 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.93■□□□□ 0.94
MBD3O95983 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD3O95983 AC034236.2-201ENST00000606662 1610 ntBASIC20.93■□□□□ 0.94
MBD3O95983 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MBD3O95983 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
MBD3O95983 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.92■□□□□ 0.94
MBD3O95983 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
MBD3O95983 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
MBD3O95983 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MBD3O95983 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MBD3O95983 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
MBD3O95983 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
MBD3O95983 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
MBD3O95983 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.92■□□□□ 0.94
MBD3O95983 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.92■□□□□ 0.94
MBD3O95983 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
MBD3O95983 KRT16P5-201ENST00000455284 522 ntBASIC20.92■□□□□ 0.94
MBD3O95983 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.92■□□□□ 0.94
MBD3O95983 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.92■□□□□ 0.94
MBD3O95983 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.92■□□□□ 0.94
MBD3O95983 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.92■□□□□ 0.94
MBD3O95983 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.92■□□□□ 0.94
MBD3O95983 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.92■□□□□ 0.94
MBD3O95983 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.92■□□□□ 0.94
MBD3O95983 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MBD3O95983 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
MBD3O95983 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.92■□□□□ 0.94
MBD3O95983 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.92■□□□□ 0.94
MBD3O95983 AL138688.1-201ENST00000624851 1594 ntBASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms