Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
CLDN11O75508 TSPY12P-201ENST00000421279 868 ntBASIC18.61■□□□□ 0.57
CLDN11O75508 AP002383.4-201ENST00000442518 975 ntBASIC18.61■□□□□ 0.57
CLDN11O75508 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN11O75508 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
CLDN11O75508 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.61■□□□□ 0.57
CLDN11O75508 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.61■□□□□ 0.57
CLDN11O75508 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN11O75508 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN11O75508 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CLDN11O75508 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CLDN11O75508 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.61■□□□□ 0.57
CLDN11O75508 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CLDN11O75508 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN11O75508 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN11O75508 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN11O75508 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN11O75508 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.61■□□□□ 0.57
CLDN11O75508 PHGDH-209ENST00000641074 1780 ntBASIC18.6■□□□□ 0.57
CLDN11O75508 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN11O75508 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN11O75508 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLDN11O75508 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN11O75508 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN11O75508 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN11O75508 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN11O75508 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN11O75508 LINC00167-201ENST00000530583 1419 ntBASIC18.6■□□□□ 0.57
CLDN11O75508 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN11O75508 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN11O75508 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN11O75508 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN11O75508 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.6■□□□□ 0.57
CLDN11O75508 RN7SL606P-201ENST00000472779 293 ntBASIC18.6■□□□□ 0.57
CLDN11O75508 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLDN11O75508 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.6■□□□□ 0.57
CLDN11O75508 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN11O75508 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CLDN11O75508 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.6■□□□□ 0.57
CLDN11O75508 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.6■□□□□ 0.57
CLDN11O75508 AP002414.4-201ENST00000589764 1148 ntBASIC18.6■□□□□ 0.57
CLDN11O75508 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.6■□□□□ 0.57
CLDN11O75508 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CLDN11O75508 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CLDN11O75508 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CLDN11O75508 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN11O75508 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN11O75508 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN11O75508 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN11O75508 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN11O75508 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN11O75508 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.59■□□□□ 0.57
CLDN11O75508 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.59■□□□□ 0.57
CLDN11O75508 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.59■□□□□ 0.57
CLDN11O75508 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CLDN11O75508 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN11O75508 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN11O75508 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN11O75508 DRAXINP1-201ENST00000437611 948 ntBASIC18.59■□□□□ 0.57
CLDN11O75508 HCG4P8-203ENST00000443049 980 ntBASIC18.59■□□□□ 0.57
CLDN11O75508 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.59■□□□□ 0.57
CLDN11O75508 MIR3180-1-201ENST00000580374 94 ntBASIC18.59■□□□□ 0.57
CLDN11O75508 MIR3180-3-201ENST00000584616 94 ntBASIC18.59■□□□□ 0.57
CLDN11O75508 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.59■□□□□ 0.57
CLDN11O75508 AC092329.2-201ENST00000598402 547 ntBASIC18.59■□□□□ 0.57
CLDN11O75508 AL592071.1-201ENST00000611956 408 ntBASIC18.59■□□□□ 0.57
CLDN11O75508 AC092119.3-201ENST00000612618 583 ntBASIC18.59■□□□□ 0.57
CLDN11O75508 AC009154.2-201ENST00000621177 724 ntBASIC18.59■□□□□ 0.57
CLDN11O75508 AC124864.1-201ENST00000623408 392 ntBASIC18.59■□□□□ 0.57
CLDN11O75508 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN11O75508 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CLDN11O75508 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN11O75508 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN11O75508 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN11O75508 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN11O75508 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN11O75508 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN11O75508 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
CLDN11O75508 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN11O75508 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN11O75508 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.59■□□□□ 0.57
CLDN11O75508 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN11O75508 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.59■□□□□ 0.57
CLDN11O75508 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.59■□□□□ 0.57
CLDN11O75508 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CLDN11O75508 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.59■□□□□ 0.57
CLDN11O75508 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN11O75508 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CLDN11O75508 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.59■□□□□ 0.57
CLDN11O75508 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN11O75508 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN11O75508 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN11O75508 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN11O75508 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN11O75508 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN11O75508 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
CLDN11O75508 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN11O75508 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN11O75508 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN11O75508 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms