Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AC073648.2-201ENST00000510116 352 ntBASIC21.28■■□□□ 1
CTNND1O60716 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC21.28■■□□□ 1
CTNND1O60716 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC21.28■■□□□ 1
CTNND1O60716 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.28■■□□□ 1
CTNND1O60716 AC011467.2-201ENST00000598425 242 ntBASIC21.28■■□□□ 1
CTNND1O60716 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC21.28■■□□□ 1
CTNND1O60716 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.28■■□□□ 1
CTNND1O60716 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CTNND1O60716 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CTNND1O60716 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CTNND1O60716 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.28■■□□□ 1
CTNND1O60716 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
CTNND1O60716 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.27■■□□□ 1
CTNND1O60716 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.27■■□□□ 1
CTNND1O60716 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.27■■□□□ 1
CTNND1O60716 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.27■■□□□ 1
CTNND1O60716 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CTNND1O60716 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.27■■□□□ 1
CTNND1O60716 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.27■■□□□ 1
CTNND1O60716 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.27■■□□□ 1
CTNND1O60716 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CTNND1O60716 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.27■■□□□ 1
CTNND1O60716 LINC00602-201ENST00000629776 2065 ntBASIC21.27■■□□□ 1
CTNND1O60716 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CTNND1O60716 AC243591.1-201ENST00000452967 1364 ntBASIC21.27■■□□□ 1
CTNND1O60716 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CTNND1O60716 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CTNND1O60716 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CTNND1O60716 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.27■■□□□ 1
CTNND1O60716 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC21.27■■□□□ 1
CTNND1O60716 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.27■■□□□ 1
CTNND1O60716 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC21.27■■□□□ 1
CTNND1O60716 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC21.27■■□□□ 1
CTNND1O60716 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.27■■□□□ 1
CTNND1O60716 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.27■■□□□ 1
CTNND1O60716 AP001269.4-201ENST00000609611 512 ntBASIC21.27■■□□□ 1
CTNND1O60716 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC21.27■■□□□ 1
CTNND1O60716 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC21.27■■□□□ 1
CTNND1O60716 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.27■■□□□ 1
CTNND1O60716 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC21.27■■□□□ 1
CTNND1O60716 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CTNND1O60716 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CTNND1O60716 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC21.27■■□□□ 1
CTNND1O60716 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CTNND1O60716 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
CTNND1O60716 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CTNND1O60716 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CTNND1O60716 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.27■□□□□ 0.99
CTNND1O60716 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CTNND1O60716 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.27■□□□□ 0.99
CTNND1O60716 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.27■□□□□ 0.99
CTNND1O60716 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTNND1O60716 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CTNND1O60716 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTNND1O60716 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTNND1O60716 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTNND1O60716 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CTNND1O60716 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CTNND1O60716 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC21.26■□□□□ 0.99
CTNND1O60716 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTNND1O60716 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.26■□□□□ 0.99
CTNND1O60716 KRT18P58-201ENST00000527480 1120 ntBASIC21.26■□□□□ 0.99
CTNND1O60716 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.26■□□□□ 0.99
CTNND1O60716 AC106730.1-201ENST00000566722 1090 ntBASIC21.26■□□□□ 0.99
CTNND1O60716 AC139887.3-201ENST00000568585 713 ntBASIC21.26■□□□□ 0.99
CTNND1O60716 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC21.26■□□□□ 0.99
CTNND1O60716 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.26■□□□□ 0.99
CTNND1O60716 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.26■□□□□ 0.99
CTNND1O60716 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC21.26■□□□□ 0.99
CTNND1O60716 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CTNND1O60716 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.26■□□□□ 0.99
CTNND1O60716 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.26■□□□□ 0.99
CTNND1O60716 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CTNND1O60716 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTNND1O60716 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTNND1O60716 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTNND1O60716 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CTNND1O60716 LINC01126-201ENST00000623515 1646 ntBASIC21.26■□□□□ 0.99
CTNND1O60716 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.25■□□□□ 0.99
CTNND1O60716 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTNND1O60716 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTNND1O60716 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTNND1O60716 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.25■□□□□ 0.99
CTNND1O60716 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CTNND1O60716 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
CTNND1O60716 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTNND1O60716 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC21.25■□□□□ 0.99
CTNND1O60716 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.25■□□□□ 0.99
CTNND1O60716 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21.25■□□□□ 0.99
CTNND1O60716 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CTNND1O60716 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTNND1O60716 AL049840.3-201ENST00000602669 611 ntBASIC21.25■□□□□ 0.99
CTNND1O60716 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.25■□□□□ 0.99
CTNND1O60716 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.25■□□□□ 0.99
CTNND1O60716 FAM215A-202ENST00000632077 792 ntBASIC21.25■□□□□ 0.99
CTNND1O60716 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.25■□□□□ 0.99
CTNND1O60716 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.25■□□□□ 0.99
CTNND1O60716 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CTNND1O60716 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.24■□□□□ 0.99
CTNND1O60716 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms