Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.14■□□□□ 0.49
KLHL41O60662 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.14■□□□□ 0.49
KLHL41O60662 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KLHL41O60662 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.14■□□□□ 0.49
KLHL41O60662 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.14■□□□□ 0.49
KLHL41O60662 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KLHL41O60662 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
KLHL41O60662 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
KLHL41O60662 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.14■□□□□ 0.49
KLHL41O60662 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KLHL41O60662 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
KLHL41O60662 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KLHL41O60662 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
KLHL41O60662 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.14■□□□□ 0.49
KLHL41O60662 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.14■□□□□ 0.49
KLHL41O60662 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KLHL41O60662 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KLHL41O60662 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
KLHL41O60662 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
KLHL41O60662 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
KLHL41O60662 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
KLHL41O60662 KRT8P41-201ENST00000533985 1514 ntBASIC18.13■□□□□ 0.49
KLHL41O60662 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KLHL41O60662 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
KLHL41O60662 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.13■□□□□ 0.49
KLHL41O60662 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KLHL41O60662 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
KLHL41O60662 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KLHL41O60662 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.13■□□□□ 0.49
KLHL41O60662 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KLHL41O60662 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.13■□□□□ 0.49
KLHL41O60662 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KLHL41O60662 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KLHL41O60662 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.13■□□□□ 0.49
KLHL41O60662 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
KLHL41O60662 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KLHL41O60662 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KLHL41O60662 AC005521.1-201ENST00000393351 872 ntBASIC18.13■□□□□ 0.49
KLHL41O60662 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.13■□□□□ 0.49
KLHL41O60662 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
KLHL41O60662 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.13■□□□□ 0.49
KLHL41O60662 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
KLHL41O60662 EGLN1P1-201ENST00000531623 762 ntBASIC18.13■□□□□ 0.49
KLHL41O60662 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.13■□□□□ 0.49
KLHL41O60662 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KLHL41O60662 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
KLHL41O60662 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.13■□□□□ 0.49
KLHL41O60662 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KLHL41O60662 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KLHL41O60662 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
KLHL41O60662 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.13■□□□□ 0.49
KLHL41O60662 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
KLHL41O60662 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
KLHL41O60662 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.13■□□□□ 0.49
KLHL41O60662 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KLHL41O60662 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KLHL41O60662 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
KLHL41O60662 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
KLHL41O60662 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KLHL41O60662 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.12■□□□□ 0.49
KLHL41O60662 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.12■□□□□ 0.49
KLHL41O60662 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
KLHL41O60662 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KLHL41O60662 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
KLHL41O60662 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
KLHL41O60662 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
KLHL41O60662 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KLHL41O60662 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.12■□□□□ 0.49
KLHL41O60662 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
KLHL41O60662 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.12■□□□□ 0.49
KLHL41O60662 ATP5G1P1-201ENST00000448724 379 ntBASIC18.12■□□□□ 0.49
KLHL41O60662 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.12■□□□□ 0.49
KLHL41O60662 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.12■□□□□ 0.49
KLHL41O60662 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.12■□□□□ 0.49
KLHL41O60662 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.12■□□□□ 0.49
KLHL41O60662 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KLHL41O60662 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
KLHL41O60662 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KLHL41O60662 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KLHL41O60662 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
KLHL41O60662 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
KLHL41O60662 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KLHL41O60662 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KLHL41O60662 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
KLHL41O60662 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KLHL41O60662 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
KLHL41O60662 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KLHL41O60662 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
KLHL41O60662 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
KLHL41O60662 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KLHL41O60662 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KLHL41O60662 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
KLHL41O60662 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
KLHL41O60662 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.11■□□□□ 0.49
KLHL41O60662 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.11■□□□□ 0.49
KLHL41O60662 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
KLHL41O60662 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
KLHL41O60662 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KLHL41O60662 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.11■□□□□ 0.49
KLHL41O60662 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms