Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.22■□□□□ 0.35
URB1O60287 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
URB1O60287 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.22■□□□□ 0.35
URB1O60287 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
URB1O60287 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
URB1O60287 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
URB1O60287 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
URB1O60287 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
URB1O60287 RPS2P1-201ENST00000434010 821 ntBASIC17.22■□□□□ 0.35
URB1O60287 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.22■□□□□ 0.35
URB1O60287 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.22■□□□□ 0.35
URB1O60287 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.22■□□□□ 0.35
URB1O60287 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.22■□□□□ 0.35
URB1O60287 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.22■□□□□ 0.35
URB1O60287 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
URB1O60287 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
URB1O60287 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
URB1O60287 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
URB1O60287 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
URB1O60287 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
URB1O60287 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
URB1O60287 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
URB1O60287 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.21■□□□□ 0.35
URB1O60287 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.21■□□□□ 0.35
URB1O60287 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.21■□□□□ 0.35
URB1O60287 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.21■□□□□ 0.35
URB1O60287 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.21■□□□□ 0.35
URB1O60287 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
URB1O60287 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
URB1O60287 AC239800.4-201ENST00000603712 296 ntBASIC17.21■□□□□ 0.35
URB1O60287 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.21■□□□□ 0.35
URB1O60287 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
URB1O60287 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
URB1O60287 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.21■□□□□ 0.35
URB1O60287 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
URB1O60287 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.21■□□□□ 0.35
URB1O60287 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
URB1O60287 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
URB1O60287 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
URB1O60287 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
URB1O60287 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.21■□□□□ 0.34
URB1O60287 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.21■□□□□ 0.34
URB1O60287 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
URB1O60287 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.21■□□□□ 0.34
URB1O60287 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
URB1O60287 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
URB1O60287 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.2■□□□□ 0.34
URB1O60287 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
URB1O60287 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.2■□□□□ 0.34
URB1O60287 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
URB1O60287 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.2■□□□□ 0.34
URB1O60287 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
URB1O60287 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
URB1O60287 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
URB1O60287 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
URB1O60287 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
URB1O60287 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
URB1O60287 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
URB1O60287 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
URB1O60287 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
URB1O60287 RFPL4AP1-201ENST00000530883 850 ntBASIC17.2■□□□□ 0.34
URB1O60287 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.2■□□□□ 0.34
URB1O60287 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.2■□□□□ 0.34
URB1O60287 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.2■□□□□ 0.34
URB1O60287 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.2■□□□□ 0.34
URB1O60287 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
URB1O60287 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
URB1O60287 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.2■□□□□ 0.34
URB1O60287 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
URB1O60287 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.2■□□□□ 0.34
URB1O60287 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.2■□□□□ 0.34
URB1O60287 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
URB1O60287 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
URB1O60287 AC007952.6-201ENST00000573168 2673 ntBASIC17.2■□□□□ 0.34
URB1O60287 AC003957.1-201ENST00000625108 2673 ntBASIC17.2■□□□□ 0.34
URB1O60287 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.2■□□□□ 0.34
URB1O60287 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
URB1O60287 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
URB1O60287 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.2■□□□□ 0.34
URB1O60287 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
URB1O60287 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
URB1O60287 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
URB1O60287 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
URB1O60287 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
URB1O60287 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
URB1O60287 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.19■□□□□ 0.34
URB1O60287 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.19■□□□□ 0.34
URB1O60287 AC244107.1-201ENST00000442033 332 ntBASIC17.19■□□□□ 0.34
URB1O60287 AP006288.1-201ENST00000446065 395 ntBASIC17.19■□□□□ 0.34
URB1O60287 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.19■□□□□ 0.34
URB1O60287 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.19■□□□□ 0.34
URB1O60287 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
URB1O60287 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
URB1O60287 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
URB1O60287 KRT18P28-201ENST00000453838 1332 ntBASIC17.19■□□□□ 0.34
URB1O60287 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.19■□□□□ 0.34
URB1O60287 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
URB1O60287 TCF3P1-201ENST00000423021 1937 ntBASIC17.19■□□□□ 0.34
URB1O60287 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
URB1O60287 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms