Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.82■□□□□ 0.44
PEX1O43933 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PEX1O43933 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PEX1O43933 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PEX1O43933 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PEX1O43933 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PEX1O43933 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PEX1O43933 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PEX1O43933 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PEX1O43933 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PEX1O43933 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
PEX1O43933 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PEX1O43933 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PEX1O43933 MIR1238-201ENST00000408483 83 ntBASIC17.82■□□□□ 0.44
PEX1O43933 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.82■□□□□ 0.44
PEX1O43933 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PEX1O43933 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.82■□□□□ 0.44
PEX1O43933 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PEX1O43933 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
PEX1O43933 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PEX1O43933 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.82■□□□□ 0.44
PEX1O43933 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PEX1O43933 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PEX1O43933 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PEX1O43933 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PEX1O43933 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PEX1O43933 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PEX1O43933 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.81■□□□□ 0.44
PEX1O43933 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PEX1O43933 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PEX1O43933 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PEX1O43933 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PEX1O43933 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.81■□□□□ 0.44
PEX1O43933 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PEX1O43933 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.81■□□□□ 0.44
PEX1O43933 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PEX1O43933 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PEX1O43933 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PEX1O43933 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PEX1O43933 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.81■□□□□ 0.44
PEX1O43933 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.81■□□□□ 0.44
PEX1O43933 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PEX1O43933 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.81■□□□□ 0.44
PEX1O43933 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.81■□□□□ 0.44
PEX1O43933 AC026271.3-201ENST00000571884 352 ntBASIC17.81■□□□□ 0.44
PEX1O43933 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.81■□□□□ 0.44
PEX1O43933 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.81■□□□□ 0.44
PEX1O43933 AC097493.4-201ENST00000641197 219 ntBASIC17.81■□□□□ 0.44
PEX1O43933 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PEX1O43933 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
PEX1O43933 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.81■□□□□ 0.44
PEX1O43933 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PEX1O43933 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PEX1O43933 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.81■□□□□ 0.44
PEX1O43933 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PEX1O43933 FSCN1P1-201ENST00000568912 1481 ntBASIC17.81■□□□□ 0.44
PEX1O43933 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.81■□□□□ 0.44
PEX1O43933 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PEX1O43933 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PEX1O43933 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PEX1O43933 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PEX1O43933 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PEX1O43933 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PEX1O43933 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PEX1O43933 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.8■□□□□ 0.44
PEX1O43933 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PEX1O43933 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.8■□□□□ 0.44
PEX1O43933 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PEX1O43933 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.8■□□□□ 0.44
PEX1O43933 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PEX1O43933 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PEX1O43933 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PEX1O43933 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PEX1O43933 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.8■□□□□ 0.44
PEX1O43933 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
PEX1O43933 AC012306.2-201ENST00000609350 630 ntBASIC17.8■□□□□ 0.44
PEX1O43933 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.8■□□□□ 0.44
PEX1O43933 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.8■□□□□ 0.44
PEX1O43933 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PEX1O43933 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PEX1O43933 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PEX1O43933 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PEX1O43933 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PEX1O43933 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PEX1O43933 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PEX1O43933 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PEX1O43933 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.8■□□□□ 0.44
PEX1O43933 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PEX1O43933 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PEX1O43933 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PEX1O43933 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PEX1O43933 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PEX1O43933 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PEX1O43933 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PEX1O43933 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PEX1O43933 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PEX1O43933 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PEX1O43933 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PEX1O43933 AC080080.1-201ENST00000625121 2420 ntBASIC17.79■□□□□ 0.44
PEX1O43933 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms