Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
IDH3BO43837 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IDH3BO43837 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
IDH3BO43837 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
IDH3BO43837 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
IDH3BO43837 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IDH3BO43837 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IDH3BO43837 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.79■□□□□ 0.28
IDH3BO43837 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IDH3BO43837 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IDH3BO43837 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.79■□□□□ 0.28
IDH3BO43837 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
IDH3BO43837 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.79■□□□□ 0.28
IDH3BO43837 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.79■□□□□ 0.28
IDH3BO43837 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.79■□□□□ 0.28
IDH3BO43837 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
IDH3BO43837 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IDH3BO43837 CKBP1-201ENST00000565489 1086 ntBASIC16.79■□□□□ 0.28
IDH3BO43837 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IDH3BO43837 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.79■□□□□ 0.28
IDH3BO43837 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IDH3BO43837 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IDH3BO43837 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
IDH3BO43837 AL357033.4-201ENST00000617703 1807 ntBASIC16.79■□□□□ 0.28
IDH3BO43837 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IDH3BO43837 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.79■□□□□ 0.28
IDH3BO43837 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
IDH3BO43837 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IDH3BO43837 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IDH3BO43837 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IDH3BO43837 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IDH3BO43837 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
IDH3BO43837 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IDH3BO43837 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IDH3BO43837 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IDH3BO43837 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IDH3BO43837 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.78■□□□□ 0.28
IDH3BO43837 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IDH3BO43837 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
IDH3BO43837 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.78■□□□□ 0.28
IDH3BO43837 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.78■□□□□ 0.28
IDH3BO43837 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.78■□□□□ 0.28
IDH3BO43837 AC006058.3-201ENST00000606217 1069 ntBASIC16.78■□□□□ 0.28
IDH3BO43837 AC011298.2-201ENST00000617989 482 ntBASIC16.78■□□□□ 0.28
IDH3BO43837 AC130371.2-201ENST00000619443 611 ntBASIC16.78■□□□□ 0.28
IDH3BO43837 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
IDH3BO43837 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
IDH3BO43837 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
IDH3BO43837 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
IDH3BO43837 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IDH3BO43837 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IDH3BO43837 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IDH3BO43837 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IDH3BO43837 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IDH3BO43837 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.78■□□□□ 0.28
IDH3BO43837 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.78■□□□□ 0.28
IDH3BO43837 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
IDH3BO43837 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IDH3BO43837 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
IDH3BO43837 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IDH3BO43837 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.77■□□□□ 0.28
IDH3BO43837 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
IDH3BO43837 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IDH3BO43837 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
IDH3BO43837 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
IDH3BO43837 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.77■□□□□ 0.28
IDH3BO43837 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
IDH3BO43837 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IDH3BO43837 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IDH3BO43837 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
IDH3BO43837 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.77■□□□□ 0.28
IDH3BO43837 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IDH3BO43837 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IDH3BO43837 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
IDH3BO43837 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IDH3BO43837 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IDH3BO43837 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IDH3BO43837 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
IDH3BO43837 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
IDH3BO43837 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.77■□□□□ 0.28
IDH3BO43837 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.77■□□□□ 0.28
IDH3BO43837 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.77■□□□□ 0.28
IDH3BO43837 RARRES2P10-201ENST00000564312 460 ntBASIC16.77■□□□□ 0.28
IDH3BO43837 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
IDH3BO43837 AC073195.1-201ENST00000607241 877 ntBASIC16.77■□□□□ 0.28
IDH3BO43837 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.77■□□□□ 0.28
IDH3BO43837 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.77■□□□□ 0.28
IDH3BO43837 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IDH3BO43837 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.77■□□□□ 0.28
IDH3BO43837 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
IDH3BO43837 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
IDH3BO43837 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
IDH3BO43837 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
IDH3BO43837 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.77■□□□□ 0.27
IDH3BO43837 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
IDH3BO43837 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.76■□□□□ 0.27
IDH3BO43837 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IDH3BO43837 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IDH3BO43837 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
IDH3BO43837 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms