Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.4■□□□□ 0.54
SMAD6O43541 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMAD6O43541 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
SMAD6O43541 AC091607.1-201ENST00000490318 1060 ntBASIC18.4■□□□□ 0.54
SMAD6O43541 AP000867.3-201ENST00000524675 377 ntBASIC18.4■□□□□ 0.54
SMAD6O43541 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.4■□□□□ 0.54
SMAD6O43541 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.4■□□□□ 0.54
SMAD6O43541 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.4■□□□□ 0.54
SMAD6O43541 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMAD6O43541 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.4■□□□□ 0.54
SMAD6O43541 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMAD6O43541 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.4■□□□□ 0.54
SMAD6O43541 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.4■□□□□ 0.54
SMAD6O43541 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMAD6O43541 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SMAD6O43541 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMAD6O43541 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.4■□□□□ 0.54
SMAD6O43541 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMAD6O43541 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SMAD6O43541 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMAD6O43541 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SMAD6O43541 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SMAD6O43541 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SMAD6O43541 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMAD6O43541 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.39■□□□□ 0.53
SMAD6O43541 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMAD6O43541 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
SMAD6O43541 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMAD6O43541 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.39■□□□□ 0.53
SMAD6O43541 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMAD6O43541 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMAD6O43541 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMAD6O43541 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMAD6O43541 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMAD6O43541 TSPY12P-201ENST00000421279 868 ntBASIC18.39■□□□□ 0.53
SMAD6O43541 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.39■□□□□ 0.53
SMAD6O43541 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.39■□□□□ 0.53
SMAD6O43541 MIR3652-201ENST00000579335 131 ntBASIC18.39■□□□□ 0.53
SMAD6O43541 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.39■□□□□ 0.53
SMAD6O43541 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SMAD6O43541 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMAD6O43541 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SMAD6O43541 AC233702.3-201ENST00000578656 1387 ntBASIC18.39■□□□□ 0.53
SMAD6O43541 AC009113.1-201ENST00000570267 2443 ntBASIC18.39■□□□□ 0.53
SMAD6O43541 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMAD6O43541 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMAD6O43541 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SMAD6O43541 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.39■□□□□ 0.53
SMAD6O43541 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMAD6O43541 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMAD6O43541 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMAD6O43541 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMAD6O43541 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMAD6O43541 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.38■□□□□ 0.53
SMAD6O43541 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.38■□□□□ 0.53
SMAD6O43541 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMAD6O43541 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
SMAD6O43541 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMAD6O43541 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMAD6O43541 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMAD6O43541 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.38■□□□□ 0.53
SMAD6O43541 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMAD6O43541 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMAD6O43541 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.38■□□□□ 0.53
SMAD6O43541 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.38■□□□□ 0.53
SMAD6O43541 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.38■□□□□ 0.53
SMAD6O43541 AP005901.3-202ENST00000581653 237 ntBASIC18.38■□□□□ 0.53
SMAD6O43541 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SMAD6O43541 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
SMAD6O43541 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.38■□□□□ 0.53
SMAD6O43541 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMAD6O43541 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.38■□□□□ 0.53
SMAD6O43541 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.38■□□□□ 0.53
SMAD6O43541 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMAD6O43541 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMAD6O43541 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.38■□□□□ 0.53
SMAD6O43541 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.38■□□□□ 0.53
SMAD6O43541 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.38■□□□□ 0.53
SMAD6O43541 AC132938.6-201ENST00000623828 1655 ntBASIC18.38■□□□□ 0.53
SMAD6O43541 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMAD6O43541 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMAD6O43541 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD6O43541 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD6O43541 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD6O43541 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD6O43541 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD6O43541 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD6O43541 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.37■□□□□ 0.53
SMAD6O43541 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.37■□□□□ 0.53
SMAD6O43541 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SMAD6O43541 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD6O43541 AC135776.1-201ENST00000319817 2481 ntBASIC18.37■□□□□ 0.53
SMAD6O43541 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD6O43541 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD6O43541 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD6O43541 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.37■□□□□ 0.53
SMAD6O43541 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMAD6O43541 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.37■□□□□ 0.53
SMAD6O43541 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.37■□□□□ 0.53
SMAD6O43541 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms