Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21■□□□□ 0.95
PRPF3O43395 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PRPF3O43395 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PRPF3O43395 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
PRPF3O43395 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PRPF3O43395 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.99■□□□□ 0.95
PRPF3O43395 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRPF3O43395 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.99■□□□□ 0.95
PRPF3O43395 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRPF3O43395 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PRPF3O43395 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.99■□□□□ 0.95
PRPF3O43395 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRPF3O43395 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRPF3O43395 IGHGP-201ENST00000390555 1178 ntBASIC20.99■□□□□ 0.95
PRPF3O43395 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PRPF3O43395 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.99■□□□□ 0.95
PRPF3O43395 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.99■□□□□ 0.95
PRPF3O43395 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.99■□□□□ 0.95
PRPF3O43395 AL121956.5-201ENST00000625261 221 ntBASIC20.99■□□□□ 0.95
PRPF3O43395 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PRPF3O43395 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.99■□□□□ 0.95
PRPF3O43395 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PRPF3O43395 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRPF3O43395 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.99■□□□□ 0.95
PRPF3O43395 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRPF3O43395 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PRPF3O43395 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PRPF3O43395 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PRPF3O43395 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRPF3O43395 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PRPF3O43395 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRPF3O43395 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRPF3O43395 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRPF3O43395 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.98■□□□□ 0.95
PRPF3O43395 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRPF3O43395 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRPF3O43395 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRPF3O43395 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRPF3O43395 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
PRPF3O43395 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRPF3O43395 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRPF3O43395 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRPF3O43395 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRPF3O43395 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.98■□□□□ 0.95
PRPF3O43395 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.98■□□□□ 0.95
PRPF3O43395 RNF126P1-202ENST00000569893 925 ntBASIC20.98■□□□□ 0.95
PRPF3O43395 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.98■□□□□ 0.95
PRPF3O43395 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.98■□□□□ 0.95
PRPF3O43395 AC004263.2-201ENST00000617183 678 ntBASIC20.98■□□□□ 0.95
PRPF3O43395 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.98■□□□□ 0.95
PRPF3O43395 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.98■□□□□ 0.95
PRPF3O43395 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRPF3O43395 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRPF3O43395 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRPF3O43395 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.98■□□□□ 0.95
PRPF3O43395 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PRPF3O43395 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRPF3O43395 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRPF3O43395 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.98■□□□□ 0.95
PRPF3O43395 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRPF3O43395 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRPF3O43395 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRPF3O43395 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRPF3O43395 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF3O43395 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.97■□□□□ 0.95
PRPF3O43395 AC138028.4-201ENST00000564984 1845 ntBASIC20.97■□□□□ 0.95
PRPF3O43395 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF3O43395 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF3O43395 LINC00602-201ENST00000629776 2065 ntBASIC20.97■□□□□ 0.95
PRPF3O43395 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF3O43395 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF3O43395 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF3O43395 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF3O43395 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.97■□□□□ 0.95
PRPF3O43395 FAM86EP-206ENST00000510506 987 ntBASIC20.97■□□□□ 0.95
PRPF3O43395 DUTP2-201ENST00000519164 463 ntBASIC20.97■□□□□ 0.95
PRPF3O43395 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.97■□□□□ 0.95
PRPF3O43395 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.97■□□□□ 0.95
PRPF3O43395 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.97■□□□□ 0.95
PRPF3O43395 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.97■□□□□ 0.95
PRPF3O43395 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.97■□□□□ 0.95
PRPF3O43395 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF3O43395 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF3O43395 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PRPF3O43395 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF3O43395 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF3O43395 FLJ13224-201ENST00000313737 1514 ntBASIC20.97■□□□□ 0.95
PRPF3O43395 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.97■□□□□ 0.95
PRPF3O43395 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF3O43395 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.97■□□□□ 0.95
PRPF3O43395 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF3O43395 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF3O43395 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPF3O43395 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRPF3O43395 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRPF3O43395 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.96■□□□□ 0.95
PRPF3O43395 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PRPF3O43395 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRPF3O43395 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.96■□□□□ 0.95
PRPF3O43395 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms