Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TO15178 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.8■□□□□ 0.28
TO15178 KRT18P35-201ENST00000510488 1269 ntBASIC16.8■□□□□ 0.28
TO15178 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.8■□□□□ 0.28
TO15178 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.8■□□□□ 0.28
TO15178 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.8■□□□□ 0.28
TO15178 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TO15178 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TO15178 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.8■□□□□ 0.28
TO15178 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TO15178 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TO15178 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TO15178 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TO15178 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TO15178 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TO15178 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TO15178 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TO15178 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TO15178 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TO15178 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TO15178 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TO15178 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TO15178 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TO15178 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TO15178 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TO15178 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TO15178 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TO15178 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.79■□□□□ 0.28
TO15178 AC087388.1-201ENST00000571370 1112 ntBASIC16.79■□□□□ 0.28
TO15178 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.79■□□□□ 0.28
TO15178 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.79■□□□□ 0.28
TO15178 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.79■□□□□ 0.28
TO15178 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.79■□□□□ 0.28
TO15178 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.79■□□□□ 0.28
TO15178 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TO15178 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.79■□□□□ 0.28
TO15178 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TO15178 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TO15178 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TO15178 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TO15178 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TO15178 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TO15178 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TO15178 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TO15178 AC135776.1-201ENST00000319817 2481 ntBASIC16.79■□□□□ 0.28
TO15178 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TO15178 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TO15178 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.79■□□□□ 0.28
TO15178 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TO15178 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TO15178 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TO15178 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TO15178 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TO15178 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.78■□□□□ 0.28
TO15178 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
TO15178 AC093010.1-201ENST00000473625 1624 ntBASIC16.78■□□□□ 0.28
TO15178 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.78■□□□□ 0.28
TO15178 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.78■□□□□ 0.28
TO15178 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TO15178 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TO15178 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TO15178 IGHGP-201ENST00000390555 1178 ntBASIC16.78■□□□□ 0.28
TO15178 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TO15178 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TO15178 AL645929.1-201ENST00000420084 975 ntBASIC16.78■□□□□ 0.28
TO15178 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.78■□□□□ 0.28
TO15178 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TO15178 AP003733.1-201ENST00000491725 852 ntBASIC16.78■□□□□ 0.28
TO15178 FAM86EP-206ENST00000510506 987 ntBASIC16.78■□□□□ 0.28
TO15178 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.78■□□□□ 0.28
TO15178 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.78■□□□□ 0.28
TO15178 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.78■□□□□ 0.28
TO15178 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
TO15178 AL445228.2-201ENST00000605589 952 ntBASIC16.78■□□□□ 0.28
TO15178 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.78■□□□□ 0.28
TO15178 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TO15178 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TO15178 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.78■□□□□ 0.28
TO15178 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TO15178 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TO15178 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TO15178 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
TO15178 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TO15178 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
TO15178 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TO15178 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TO15178 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TO15178 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
TO15178 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.77■□□□□ 0.28
TO15178 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
TO15178 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TO15178 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.77■□□□□ 0.28
TO15178 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
TO15178 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TO15178 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.77■□□□□ 0.28
TO15178 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TO15178 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TO15178 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TO15178 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.77■□□□□ 0.28
TO15178 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms