Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TRANK1O15050 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRANK1O15050 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRANK1O15050 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRANK1O15050 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRANK1O15050 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRANK1O15050 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRANK1O15050 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRANK1O15050 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRANK1O15050 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.11■□□□□ 0.65
TRANK1O15050 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.11■□□□□ 0.65
TRANK1O15050 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TRANK1O15050 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.11■□□□□ 0.65
TRANK1O15050 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.11■□□□□ 0.65
TRANK1O15050 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRANK1O15050 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.11■□□□□ 0.65
TRANK1O15050 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.11■□□□□ 0.65
TRANK1O15050 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRANK1O15050 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRANK1O15050 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.11■□□□□ 0.65
TRANK1O15050 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.11■□□□□ 0.65
TRANK1O15050 AC064836.3-201ENST00000607928 673 ntBASIC19.11■□□□□ 0.65
TRANK1O15050 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.11■□□□□ 0.65
TRANK1O15050 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRANK1O15050 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRANK1O15050 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.1■□□□□ 0.65
TRANK1O15050 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRANK1O15050 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TRANK1O15050 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRANK1O15050 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRANK1O15050 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.1■□□□□ 0.65
TRANK1O15050 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.1■□□□□ 0.65
TRANK1O15050 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.1■□□□□ 0.65
TRANK1O15050 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.1■□□□□ 0.65
TRANK1O15050 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.1■□□□□ 0.65
TRANK1O15050 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TRANK1O15050 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRANK1O15050 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRANK1O15050 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.1■□□□□ 0.65
TRANK1O15050 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.1■□□□□ 0.65
TRANK1O15050 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.1■□□□□ 0.65
TRANK1O15050 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.1■□□□□ 0.65
TRANK1O15050 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
TRANK1O15050 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRANK1O15050 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRANK1O15050 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.09■□□□□ 0.65
TRANK1O15050 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRANK1O15050 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
TRANK1O15050 AC093512.1-201ENST00000617969 520 ntBASIC19.09■□□□□ 0.65
TRANK1O15050 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.09■□□□□ 0.65
TRANK1O15050 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRANK1O15050 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRANK1O15050 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRANK1O15050 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRANK1O15050 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.09■□□□□ 0.65
TRANK1O15050 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRANK1O15050 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.09■□□□□ 0.65
TRANK1O15050 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRANK1O15050 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.09■□□□□ 0.65
TRANK1O15050 LINC00602-201ENST00000629776 2065 ntBASIC19.09■□□□□ 0.65
TRANK1O15050 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRANK1O15050 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRANK1O15050 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.09■□□□□ 0.65
TRANK1O15050 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.08■□□□□ 0.65
TRANK1O15050 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRANK1O15050 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.08■□□□□ 0.65
TRANK1O15050 AC007967.3-201ENST00000434308 558 ntBASIC19.08■□□□□ 0.65
TRANK1O15050 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRANK1O15050 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.08■□□□□ 0.65
TRANK1O15050 AL513190.1-201ENST00000621254 727 ntBASIC19.08■□□□□ 0.65
TRANK1O15050 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.08■□□□□ 0.65
TRANK1O15050 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRANK1O15050 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRANK1O15050 AC097374.2-201ENST00000618617 1306 ntBASIC19.08■□□□□ 0.65
TRANK1O15050 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
TRANK1O15050 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRANK1O15050 AC006504.4-201ENST00000592118 1568 ntBASIC19.08■□□□□ 0.64
TRANK1O15050 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TRANK1O15050 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRANK1O15050 HCG4B-203ENST00000450128 991 ntBASIC19.08■□□□□ 0.64
TRANK1O15050 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRANK1O15050 AC112698.1-201ENST00000510299 916 ntBASIC19.08■□□□□ 0.64
TRANK1O15050 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.08■□□□□ 0.64
TRANK1O15050 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.08■□□□□ 0.64
TRANK1O15050 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRANK1O15050 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.07■□□□□ 0.64
TRANK1O15050 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.07■□□□□ 0.64
TRANK1O15050 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
TRANK1O15050 AC011467.4-201ENST00000594891 528 ntBASIC19.07■□□□□ 0.64
TRANK1O15050 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
TRANK1O15050 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRANK1O15050 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRANK1O15050 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRANK1O15050 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TRANK1O15050 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TRANK1O15050 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.07■□□□□ 0.64
TRANK1O15050 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRANK1O15050 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
TRANK1O15050 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.07■□□□□ 0.64
TRANK1O15050 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms