Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COPEO14579 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COPEO14579 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COPEO14579 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COPEO14579 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.28■□□□□ 0.52
COPEO14579 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COPEO14579 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
COPEO14579 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
COPEO14579 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COPEO14579 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
COPEO14579 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
COPEO14579 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COPEO14579 AC008040.2-201ENST00000461049 708 ntBASIC18.28■□□□□ 0.52
COPEO14579 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
COPEO14579 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.28■□□□□ 0.52
COPEO14579 AC026271.3-201ENST00000571884 352 ntBASIC18.28■□□□□ 0.52
COPEO14579 AC008622.2-201ENST00000617006 1229 ntBASIC18.28■□□□□ 0.52
COPEO14579 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.28■□□□□ 0.52
COPEO14579 AL031985.4-201ENST00000642138 673 ntBASIC18.28■□□□□ 0.52
COPEO14579 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COPEO14579 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COPEO14579 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COPEO14579 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.28■□□□□ 0.52
COPEO14579 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COPEO14579 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
COPEO14579 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COPEO14579 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.28■□□□□ 0.52
COPEO14579 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.28■□□□□ 0.52
COPEO14579 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
COPEO14579 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COPEO14579 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
COPEO14579 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COPEO14579 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.27■□□□□ 0.52
COPEO14579 AC034236.2-201ENST00000606662 1610 ntBASIC18.27■□□□□ 0.52
COPEO14579 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.27■□□□□ 0.52
COPEO14579 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
COPEO14579 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COPEO14579 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
COPEO14579 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COPEO14579 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.27■□□□□ 0.52
COPEO14579 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COPEO14579 KRT8P50-201ENST00000562022 1438 ntBASIC18.27■□□□□ 0.52
COPEO14579 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
COPEO14579 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
COPEO14579 AL355802.2-201ENST00000402069 882 ntBASIC18.27■□□□□ 0.52
COPEO14579 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.27■□□□□ 0.52
COPEO14579 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
COPEO14579 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.27■□□□□ 0.52
COPEO14579 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
COPEO14579 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COPEO14579 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
COPEO14579 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COPEO14579 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COPEO14579 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COPEO14579 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COPEO14579 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COPEO14579 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.27■□□□□ 0.51
COPEO14579 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
COPEO14579 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
COPEO14579 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
COPEO14579 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COPEO14579 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
COPEO14579 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COPEO14579 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPEO14579 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
COPEO14579 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
COPEO14579 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPEO14579 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPEO14579 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COPEO14579 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.26■□□□□ 0.51
COPEO14579 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
COPEO14579 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
COPEO14579 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPEO14579 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
COPEO14579 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COPEO14579 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
COPEO14579 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPEO14579 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
COPEO14579 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPEO14579 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPEO14579 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COPEO14579 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPEO14579 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
COPEO14579 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
COPEO14579 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COPEO14579 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.26■□□□□ 0.51
COPEO14579 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.26■□□□□ 0.51
COPEO14579 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.26■□□□□ 0.51
COPEO14579 AC130371.2-201ENST00000619443 611 ntBASIC18.26■□□□□ 0.51
COPEO14579 CR392000.1-201ENST00000624770 1228 ntBASIC18.26■□□□□ 0.51
COPEO14579 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
COPEO14579 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
COPEO14579 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
COPEO14579 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.26■□□□□ 0.51
COPEO14579 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.26■□□□□ 0.51
COPEO14579 AC009053.2-201ENST00000563701 2365 ntBASIC18.26■□□□□ 0.51
COPEO14579 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.26■□□□□ 0.51
COPEO14579 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPEO14579 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COPEO14579 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms