Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBFD1O14562 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.72■□□□□ 0.43
UBFD1O14562 AL390955.1-201ENST00000428694 934 ntBASIC17.72■□□□□ 0.43
UBFD1O14562 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.72■□□□□ 0.43
UBFD1O14562 TSPY17P-201ENST00000450329 467 ntBASIC17.72■□□□□ 0.43
UBFD1O14562 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
UBFD1O14562 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.72■□□□□ 0.43
UBFD1O14562 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.72■□□□□ 0.43
UBFD1O14562 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBFD1O14562 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.72■□□□□ 0.43
UBFD1O14562 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
UBFD1O14562 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.72■□□□□ 0.43
UBFD1O14562 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBFD1O14562 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBFD1O14562 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBFD1O14562 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
UBFD1O14562 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBFD1O14562 KRT18P55-202ENST00000578578 1546 ntBASIC17.72■□□□□ 0.43
UBFD1O14562 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
UBFD1O14562 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBFD1O14562 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBFD1O14562 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBFD1O14562 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
UBFD1O14562 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBFD1O14562 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBFD1O14562 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBFD1O14562 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBFD1O14562 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
UBFD1O14562 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBFD1O14562 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBFD1O14562 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBFD1O14562 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBFD1O14562 UNC93B2-201ENST00000285383 730 ntBASIC17.71■□□□□ 0.43
UBFD1O14562 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBFD1O14562 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBFD1O14562 TSPY7P-201ENST00000431358 1114 ntBASIC17.71■□□□□ 0.43
UBFD1O14562 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBFD1O14562 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBFD1O14562 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.71■□□□□ 0.43
UBFD1O14562 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.71■□□□□ 0.43
UBFD1O14562 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.71■□□□□ 0.43
UBFD1O14562 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.71■□□□□ 0.43
UBFD1O14562 AP000525.1-201ENST00000608286 694 ntBASIC17.71■□□□□ 0.43
UBFD1O14562 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.71■□□□□ 0.43
UBFD1O14562 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
UBFD1O14562 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
UBFD1O14562 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.71■□□□□ 0.43
UBFD1O14562 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.71■□□□□ 0.43
UBFD1O14562 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.71■□□□□ 0.43
UBFD1O14562 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
UBFD1O14562 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBFD1O14562 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
UBFD1O14562 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
UBFD1O14562 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
UBFD1O14562 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
UBFD1O14562 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.71■□□□□ 0.42
UBFD1O14562 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
UBFD1O14562 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBFD1O14562 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBFD1O14562 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBFD1O14562 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.7■□□□□ 0.42
UBFD1O14562 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBFD1O14562 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBFD1O14562 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.7■□□□□ 0.42
UBFD1O14562 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.7■□□□□ 0.42
UBFD1O14562 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBFD1O14562 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
UBFD1O14562 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBFD1O14562 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBFD1O14562 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
UBFD1O14562 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBFD1O14562 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.7■□□□□ 0.42
UBFD1O14562 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.7■□□□□ 0.42
UBFD1O14562 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.7■□□□□ 0.42
UBFD1O14562 AC104390.1-201ENST00000555663 520 ntBASIC17.7■□□□□ 0.42
UBFD1O14562 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.7■□□□□ 0.42
UBFD1O14562 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.7■□□□□ 0.42
UBFD1O14562 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
UBFD1O14562 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.7■□□□□ 0.42
UBFD1O14562 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
UBFD1O14562 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.7■□□□□ 0.42
UBFD1O14562 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBFD1O14562 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.7■□□□□ 0.42
UBFD1O14562 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBFD1O14562 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBFD1O14562 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.7■□□□□ 0.42
UBFD1O14562 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.7■□□□□ 0.42
UBFD1O14562 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
UBFD1O14562 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBFD1O14562 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBFD1O14562 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBFD1O14562 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
UBFD1O14562 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBFD1O14562 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.69■□□□□ 0.42
UBFD1O14562 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.69■□□□□ 0.42
UBFD1O14562 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.69■□□□□ 0.42
UBFD1O14562 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.69■□□□□ 0.42
UBFD1O14562 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UBFD1O14562 AC007663.1-201ENST00000438948 1240 ntBASIC17.69■□□□□ 0.42
UBFD1O14562 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms