Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.41■□□□□ 0.38
PDLIM1O00151 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM1O00151 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PDLIM1O00151 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.41■□□□□ 0.38
PDLIM1O00151 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM1O00151 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM1O00151 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM1O00151 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM1O00151 AC092850.2-201ENST00000623821 2697 ntBASIC17.41■□□□□ 0.38
PDLIM1O00151 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PDLIM1O00151 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM1O00151 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM1O00151 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM1O00151 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
PDLIM1O00151 SLC25A6P5-201ENST00000435663 894 ntBASIC17.41■□□□□ 0.38
PDLIM1O00151 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PDLIM1O00151 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.41■□□□□ 0.38
PDLIM1O00151 AL023875.1-201ENST00000640777 796 ntBASIC17.41■□□□□ 0.38
PDLIM1O00151 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM1O00151 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.41■□□□□ 0.38
PDLIM1O00151 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM1O00151 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.41■□□□□ 0.38
PDLIM1O00151 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM1O00151 MTMR9LP-203ENST00000426597 1545 ntBASIC17.41■□□□□ 0.38
PDLIM1O00151 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM1O00151 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM1O00151 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM1O00151 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
PDLIM1O00151 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM1O00151 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM1O00151 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.4■□□□□ 0.38
PDLIM1O00151 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM1O00151 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM1O00151 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM1O00151 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.4■□□□□ 0.38
PDLIM1O00151 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.4■□□□□ 0.38
PDLIM1O00151 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM1O00151 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM1O00151 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM1O00151 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM1O00151 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM1O00151 PRKY-204ENST00000533551 1019 ntBASIC17.4■□□□□ 0.38
PDLIM1O00151 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.4■□□□□ 0.38
PDLIM1O00151 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.4■□□□□ 0.38
PDLIM1O00151 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.4■□□□□ 0.38
PDLIM1O00151 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM1O00151 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PDLIM1O00151 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.4■□□□□ 0.38
PDLIM1O00151 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.4■□□□□ 0.38
PDLIM1O00151 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.4■□□□□ 0.38
PDLIM1O00151 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM1O00151 AC011676.5-201ENST00000624864 2660 ntBASIC17.4■□□□□ 0.38
PDLIM1O00151 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM1O00151 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PDLIM1O00151 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM1O00151 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM1O00151 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM1O00151 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.39■□□□□ 0.37
PDLIM1O00151 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
PDLIM1O00151 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM1O00151 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PDLIM1O00151 AC239809.2-201ENST00000415381 517 ntBASIC17.39■□□□□ 0.37
PDLIM1O00151 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.39■□□□□ 0.37
PDLIM1O00151 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.39■□□□□ 0.37
PDLIM1O00151 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.39■□□□□ 0.37
PDLIM1O00151 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.39■□□□□ 0.37
PDLIM1O00151 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.39■□□□□ 0.37
PDLIM1O00151 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.39■□□□□ 0.37
PDLIM1O00151 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM1O00151 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM1O00151 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM1O00151 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
PDLIM1O00151 PP12613-201ENST00000424958 2230 ntBASIC17.39■□□□□ 0.37
PDLIM1O00151 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.39■□□□□ 0.37
PDLIM1O00151 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM1O00151 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDLIM1O00151 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.38■□□□□ 0.37
PDLIM1O00151 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM1O00151 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM1O00151 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.38■□□□□ 0.37
PDLIM1O00151 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.38■□□□□ 0.37
PDLIM1O00151 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
PDLIM1O00151 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM1O00151 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.38■□□□□ 0.37
PDLIM1O00151 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM1O00151 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM1O00151 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.38■□□□□ 0.37
PDLIM1O00151 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM1O00151 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.38■□□□□ 0.37
PDLIM1O00151 TSPY21P-201ENST00000433481 731 ntBASIC17.38■□□□□ 0.37
PDLIM1O00151 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.38■□□□□ 0.37
PDLIM1O00151 KRT18P16-201ENST00000510337 1294 ntBASIC17.38■□□□□ 0.37
PDLIM1O00151 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.38■□□□□ 0.37
PDLIM1O00151 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.38■□□□□ 0.37
PDLIM1O00151 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PDLIM1O00151 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM1O00151 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM1O00151 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM1O00151 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PDLIM1O00151 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms