Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 AC140113.3-201ENST00000605663 199 ntBASIC16.15■□□□□ 0.18
NPIPB4C9JG80 AC073508.3-201ENST00000619697 1419 ntBASIC16.15■□□□□ 0.18
NPIPB4C9JG80 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
NPIPB4C9JG80 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 TERF1P1-201ENST00000311003 1181 ntBASIC16.14■□□□□ 0.17
NPIPB4C9JG80 STARP1-201ENST00000397973 869 ntBASIC16.14■□□□□ 0.17
NPIPB4C9JG80 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 AL023973.1-201ENST00000624619 620 ntBASIC16.14■□□□□ 0.17
NPIPB4C9JG80 AC133561.5-201ENST00000635547 218 ntBASIC16.14■□□□□ 0.17
NPIPB4C9JG80 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
NPIPB4C9JG80 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 AL137013.1-201ENST00000432946 1228 ntBASIC16.13■□□□□ 0.17
NPIPB4C9JG80 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 AC024563.2-201ENST00000603282 481 ntBASIC16.13■□□□□ 0.17
NPIPB4C9JG80 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.13■□□□□ 0.17
NPIPB4C9JG80 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.13■□□□□ 0.17
NPIPB4C9JG80 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms