Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.41■□□□□ 0.22
TUBAL3A6NHL2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBAL3A6NHL2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBAL3A6NHL2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBAL3A6NHL2 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
TUBAL3A6NHL2 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TUBAL3A6NHL2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TUBAL3A6NHL2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBAL3A6NHL2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
TUBAL3A6NHL2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TUBAL3A6NHL2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBAL3A6NHL2 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBAL3A6NHL2 AC020763.4-201ENST00000623414 4170 ntBASIC16.41■□□□□ 0.22
TUBAL3A6NHL2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 SPDYE13P-201ENST00000445314 798 ntBASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 BX276092.5-203ENST00000456199 560 ntBASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 MIR3652-201ENST00000579335 131 ntBASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 AC092329.2-201ENST00000598402 547 ntBASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 AL121672.3-201ENST00000608644 468 ntBASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 AC092119.3-201ENST00000612618 583 ntBASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 SIRPAP1-201ENST00000448467 1770 ntBASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TUBAL3A6NHL2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.39■□□□□ 0.22
TUBAL3A6NHL2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 PRELID1P1-202ENST00000567272 903 ntBASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 AC011498.5-201ENST00000592027 486 ntBASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TUBAL3A6NHL2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms