Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 AL024508.2-201ENST00000607749 1894 ntBASIC18.27■□□□□ 0.52
CCDC162PA2VCL2 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC162PA2VCL2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC162PA2VCL2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC162PA2VCL2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC162PA2VCL2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC162PA2VCL2 AC073508.3-201ENST00000619697 1419 ntBASIC18.27■□□□□ 0.52
CCDC162PA2VCL2 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC162PA2VCL2 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC162PA2VCL2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC162PA2VCL2 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CCDC162PA2VCL2 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.27■□□□□ 0.52
CCDC162PA2VCL2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC162PA2VCL2 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CCDC162PA2VCL2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC162PA2VCL2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC162PA2VCL2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
CCDC162PA2VCL2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC162PA2VCL2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC162PA2VCL2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC162PA2VCL2 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC162PA2VCL2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CCDC162PA2VCL2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC162PA2VCL2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CCDC162PA2VCL2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC162PA2VCL2 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.27■□□□□ 0.51
CCDC162PA2VCL2 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 AL096828.2-201ENST00000567259 1965 ntBASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 AC005521.1-201ENST00000393351 872 ntBASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 AC140113.3-201ENST00000605663 199 ntBASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC162PA2VCL2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 COX11P1-201ENST00000489116 835 ntBASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC162PA2VCL2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC162PA2VCL2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC162PA2VCL2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC162PA2VCL2 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC162PA2VCL2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC162PA2VCL2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC162PA2VCL2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC162PA2VCL2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC162PA2VCL2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC162PA2VCL2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC162PA2VCL2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC162PA2VCL2 KRT18P57-201ENST00000443599 1254 ntBASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms