Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC66A2RUB6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC66A2RUB6 ANKRD26P3-201ENST00000454044 2748 ntBASIC19.79■□□□□ 0.76
CCDC66A2RUB6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC66A2RUB6 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC66A2RUB6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCDC66A2RUB6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC66A2RUB6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC66A2RUB6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC66A2RUB6 POU5F1P3-201ENST00000428824 1078 ntBASIC19.79■□□□□ 0.76
CCDC66A2RUB6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
CCDC66A2RUB6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC66A2RUB6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCDC66A2RUB6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC66A2RUB6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC66A2RUB6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC66A2RUB6 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC66A2RUB6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC66A2RUB6 RCC2P6-201ENST00000526625 1557 ntBASIC19.78■□□□□ 0.76
CCDC66A2RUB6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC66A2RUB6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC66A2RUB6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC66A2RUB6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC66A2RUB6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC66A2RUB6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCDC66A2RUB6 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC66A2RUB6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC66A2RUB6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCDC66A2RUB6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC66A2RUB6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC66A2RUB6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC66A2RUB6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CCDC66A2RUB6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC66A2RUB6 RNA5SP413-201ENST00000516373 109 ntBASIC19.78■□□□□ 0.76
CCDC66A2RUB6 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC66A2RUB6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC66A2RUB6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCDC66A2RUB6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC66A2RUB6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC66A2RUB6 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.78■□□□□ 0.76
CCDC66A2RUB6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC66A2RUB6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC66A2RUB6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC66A2RUB6 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC66A2RUB6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
CCDC66A2RUB6 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC66A2RUB6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CCDC66A2RUB6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCDC66A2RUB6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CCDC66A2RUB6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC66A2RUB6 AC239809.2-201ENST00000415381 517 ntBASIC19.77■□□□□ 0.76
CCDC66A2RUB6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.77■□□□□ 0.76
CCDC66A2RUB6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC66A2RUB6 KRT18P6-201ENST00000555540 1265 ntBASIC19.77■□□□□ 0.76
CCDC66A2RUB6 AC233263.1-201ENST00000578059 224 ntBASIC19.77■□□□□ 0.76
CCDC66A2RUB6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC66A2RUB6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC66A2RUB6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC66A2RUB6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CCDC66A2RUB6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC66A2RUB6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC66A2RUB6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CCDC66A2RUB6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC66A2RUB6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC66A2RUB6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC66A2RUB6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 KRASP1-201ENST00000407852 552 ntBASIC19.76■□□□□ 0.75
CCDC66A2RUB6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 AL023875.1-201ENST00000640777 796 ntBASIC19.76■□□□□ 0.75
CCDC66A2RUB6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
CCDC66A2RUB6 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC66A2RUB6 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms