Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SSC5DA1L4H1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SSC5DA1L4H1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSC5DA1L4H1 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC21.19■□□□□ 0.98
SSC5DA1L4H1 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC21.19■□□□□ 0.98
SSC5DA1L4H1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SSC5DA1L4H1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC21.19■□□□□ 0.98
SSC5DA1L4H1 LINC02084-201ENST00000606069 1096 ntBASIC21.19■□□□□ 0.98
SSC5DA1L4H1 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC21.19■□□□□ 0.98
SSC5DA1L4H1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SSC5DA1L4H1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.19■□□□□ 0.98
SSC5DA1L4H1 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SSC5DA1L4H1 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC21.19■□□□□ 0.98
SSC5DA1L4H1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSC5DA1L4H1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSC5DA1L4H1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SSC5DA1L4H1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSC5DA1L4H1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSC5DA1L4H1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SSC5DA1L4H1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SSC5DA1L4H1 AP006288.1-201ENST00000446065 395 ntBASIC21.19■□□□□ 0.98
SSC5DA1L4H1 AC073592.4-201ENST00000623827 446 ntBASIC21.19■□□□□ 0.98
SSC5DA1L4H1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SSC5DA1L4H1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SSC5DA1L4H1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSC5DA1L4H1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSC5DA1L4H1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSC5DA1L4H1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.18■□□□□ 0.98
SSC5DA1L4H1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SSC5DA1L4H1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.18■□□□□ 0.98
SSC5DA1L4H1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSC5DA1L4H1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SSC5DA1L4H1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.18■□□□□ 0.98
SSC5DA1L4H1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.18■□□□□ 0.98
SSC5DA1L4H1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SSC5DA1L4H1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SSC5DA1L4H1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC21.18■□□□□ 0.98
SSC5DA1L4H1 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSC5DA1L4H1 COA5-202ENST00000409997 557 ntTSL 4 BASIC21.18■□□□□ 0.98
SSC5DA1L4H1 ALG1L5P-201ENST00000482043 771 ntBASIC21.18■□□□□ 0.98
SSC5DA1L4H1 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC21.18■□□□□ 0.98
SSC5DA1L4H1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
SSC5DA1L4H1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.18■□□□□ 0.98
SSC5DA1L4H1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SSC5DA1L4H1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.18■□□□□ 0.98
SSC5DA1L4H1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SSC5DA1L4H1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSC5DA1L4H1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SSC5DA1L4H1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SSC5DA1L4H1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SSC5DA1L4H1 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSC5DA1L4H1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSC5DA1L4H1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSC5DA1L4H1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.17■□□□□ 0.98
SSC5DA1L4H1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.17■□□□□ 0.98
SSC5DA1L4H1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.17■□□□□ 0.98
SSC5DA1L4H1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.17■□□□□ 0.98
SSC5DA1L4H1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SSC5DA1L4H1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.17■□□□□ 0.98
SSC5DA1L4H1 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSC5DA1L4H1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC21.17■□□□□ 0.98
SSC5DA1L4H1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.17■□□□□ 0.98
SSC5DA1L4H1 ETFA-208ENST00000559602 792 ntTSL 3 BASIC21.17■□□□□ 0.98
SSC5DA1L4H1 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
SSC5DA1L4H1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.17■□□□□ 0.98
SSC5DA1L4H1 AC064836.3-201ENST00000607928 673 ntBASIC21.17■□□□□ 0.98
SSC5DA1L4H1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSC5DA1L4H1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SSC5DA1L4H1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.17■□□□□ 0.98
SSC5DA1L4H1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SSC5DA1L4H1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSC5DA1L4H1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SSC5DA1L4H1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSC5DA1L4H1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SSC5DA1L4H1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.16■□□□□ 0.98
SSC5DA1L4H1 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SSC5DA1L4H1 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SSC5DA1L4H1 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC21.16■□□□□ 0.98
SSC5DA1L4H1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSC5DA1L4H1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.16■□□□□ 0.98
SSC5DA1L4H1 MIR3687-2-201ENST00000577708 61 ntBASIC21.16■□□□□ 0.98
SSC5DA1L4H1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC21.16■□□□□ 0.98
SSC5DA1L4H1 MIR3687-1-201ENST00000614492 61 ntBASIC21.16■□□□□ 0.98
SSC5DA1L4H1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.16■□□□□ 0.98
SSC5DA1L4H1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSC5DA1L4H1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSC5DA1L4H1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSC5DA1L4H1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SSC5DA1L4H1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SSC5DA1L4H1 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SSC5DA1L4H1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SSC5DA1L4H1 AC132938.6-201ENST00000623828 1655 ntBASIC21.15■□□□□ 0.98
SSC5DA1L4H1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC21.15■□□□□ 0.98
SSC5DA1L4H1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SSC5DA1L4H1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSC5DA1L4H1 BEX3-201ENST00000361298 921 ntTSL 2 BASIC21.15■□□□□ 0.98
SSC5DA1L4H1 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC21.15■□□□□ 0.98
SSC5DA1L4H1 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSC5DA1L4H1 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC21.15■□□□□ 0.98
SSC5DA1L4H1 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms