Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SYCE3A1L190 MIR4758-201ENST00000577688 71 ntBASIC20.8■□□□□ 0.92
SYCE3A1L190 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYCE3A1L190 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYCE3A1L190 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SYCE3A1L190 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.8■□□□□ 0.92
SYCE3A1L190 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SYCE3A1L190 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.79■□□□□ 0.92
SYCE3A1L190 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SYCE3A1L190 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYCE3A1L190 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SYCE3A1L190 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.79■□□□□ 0.92
SYCE3A1L190 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.79■□□□□ 0.92
SYCE3A1L190 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
SYCE3A1L190 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYCE3A1L190 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SYCE3A1L190 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYCE3A1L190 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYCE3A1L190 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.79■□□□□ 0.92
SYCE3A1L190 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.79■□□□□ 0.92
SYCE3A1L190 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYCE3A1L190 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
SYCE3A1L190 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
SYCE3A1L190 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SYCE3A1L190 UBALD1-205ENST00000590891 2641 ntBASIC20.79■□□□□ 0.92
SYCE3A1L190 AL355312.1-201ENST00000407115 2176 ntBASIC20.79■□□□□ 0.92
SYCE3A1L190 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SYCE3A1L190 OR6D1P-202ENST00000641007 5290 ntBASIC20.79■□□□□ 0.92
SYCE3A1L190 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYCE3A1L190 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SYCE3A1L190 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SYCE3A1L190 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SYCE3A1L190 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.78■□□□□ 0.92
SYCE3A1L190 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYCE3A1L190 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYCE3A1L190 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.78■□□□□ 0.92
SYCE3A1L190 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SYCE3A1L190 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYCE3A1L190 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYCE3A1L190 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYCE3A1L190 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYCE3A1L190 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYCE3A1L190 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SYCE3A1L190 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.78■□□□□ 0.92
SYCE3A1L190 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.78■□□□□ 0.92
SYCE3A1L190 SLC29A4P1-201ENST00000398760 971 ntBASIC20.78■□□□□ 0.92
SYCE3A1L190 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.78■□□□□ 0.92
SYCE3A1L190 AC098934.4-201ENST00000564127 592 ntBASIC20.78■□□□□ 0.92
SYCE3A1L190 RARRES2P6-201ENST00000567333 442 ntBASIC20.78■□□□□ 0.92
SYCE3A1L190 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYCE3A1L190 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYCE3A1L190 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYCE3A1L190 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYCE3A1L190 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC20.78■□□□□ 0.92
SYCE3A1L190 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SYCE3A1L190 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYCE3A1L190 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SYCE3A1L190 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYCE3A1L190 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
SYCE3A1L190 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.78■□□□□ 0.92
SYCE3A1L190 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYCE3A1L190 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
SYCE3A1L190 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYCE3A1L190 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYCE3A1L190 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYCE3A1L190 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SYCE3A1L190 AL118508.1-201ENST00000613502 2345 ntBASIC20.77■□□□□ 0.92
SYCE3A1L190 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYCE3A1L190 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYCE3A1L190 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYCE3A1L190 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.77■□□□□ 0.92
SYCE3A1L190 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYCE3A1L190 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYCE3A1L190 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYCE3A1L190 POM121L13P-201ENST00000422362 380 ntBASIC20.77■□□□□ 0.92
SYCE3A1L190 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.77■□□□□ 0.92
SYCE3A1L190 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SYCE3A1L190 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYCE3A1L190 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.77■□□□□ 0.92
SYCE3A1L190 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.77■□□□□ 0.92
SYCE3A1L190 KRT18P55-202ENST00000578578 1546 ntBASIC20.77■□□□□ 0.92
SYCE3A1L190 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYCE3A1L190 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYCE3A1L190 AC008894.3-201ENST00000624324 3103 ntBASIC20.77■□□□□ 0.92
SYCE3A1L190 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
SYCE3A1L190 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SYCE3A1L190 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
SYCE3A1L190 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SYCE3A1L190 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SYCE3A1L190 AL109659.2-201ENST00000606809 1674 ntBASIC20.77■□□□□ 0.91
SYCE3A1L190 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYCE3A1L190 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.76■□□□□ 0.91
SYCE3A1L190 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.76■□□□□ 0.91
SYCE3A1L190 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYCE3A1L190 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYCE3A1L190 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SYCE3A1L190 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYCE3A1L190 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
SYCE3A1L190 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.76■□□□□ 0.91
SYCE3A1L190 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms