Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 RPS2P35-201ENST00000443417 897 ntBASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 AL033527.3-201ENST00000566366 1196 ntBASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 AC060766.1-201ENST00000590824 627 ntBASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.81□□□□□ -0.36
TMEM238LA0A1B0GVL6 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 AC118758.2-201ENST00000614242 2813 ntBASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 HES6-204ENST00000409182 863 ntTSL 2 BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 GRAMD4P7-201ENST00000578182 1232 ntBASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TMEM238LA0A1B0GVL6 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC12.79□□□□□ -0.36
TMEM238LA0A1B0GVL6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms