Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 FLJ16779-201ENST00000612722 7638 ntBASIC9.46□□□□□ -0.89
LINC01558Q9Y6Z2 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
LINC01558Q9Y6Z2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
LINC01558Q9Y6Z2 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
LINC01558Q9Y6Z2 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 BANP-203ENST00000393207 2438 ntTSL 2 BASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 AC092068.3-201ENST00000587894 2016 ntBASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 AC144831.1-201ENST00000573312 2656 ntBASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 AC009831.1-201ENST00000580420 1582 ntBASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
LINC01558Q9Y6Z2 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 AC067930.6-201ENST00000623257 4947 ntBASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 UBQLN4P1-201ENST00000461599 1801 ntBASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 Z92544.1-202ENST00000571933 1220 ntBASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 AC007029.1-201ENST00000604183 313 ntBASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 AP004607.4-201ENST00000530158 1459 ntBASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
LINC01558Q9Y6Z2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 MIR600HG-201ENST00000449175 5984 ntBASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC9.44□□□□□ -0.9
LINC01558Q9Y6Z2 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms