Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
AP4B1Q9Y6B7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
AP4B1Q9Y6B7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
AP4B1Q9Y6B7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
AP4B1Q9Y6B7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
AP4B1Q9Y6B7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.58■□□□□ 0.41
AP4B1Q9Y6B7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.58■□□□□ 0.4
AP4B1Q9Y6B7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AP4B1Q9Y6B7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
AP4B1Q9Y6B7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP4B1Q9Y6B7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP4B1Q9Y6B7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP4B1Q9Y6B7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.58■□□□□ 0.4
AP4B1Q9Y6B7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
AP4B1Q9Y6B7 NIFKP9-201ENST00000419265 221 ntBASIC17.58■□□□□ 0.4
AP4B1Q9Y6B7 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.58■□□□□ 0.4
AP4B1Q9Y6B7 KSR1P1-201ENST00000446298 240 ntBASIC17.58■□□□□ 0.4
AP4B1Q9Y6B7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
AP4B1Q9Y6B7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AP4B1Q9Y6B7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP4B1Q9Y6B7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.58■□□□□ 0.4
AP4B1Q9Y6B7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP4B1Q9Y6B7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP4B1Q9Y6B7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.58■□□□□ 0.4
AP4B1Q9Y6B7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP4B1Q9Y6B7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.58■□□□□ 0.4
AP4B1Q9Y6B7 AC138028.4-201ENST00000564984 1845 ntBASIC17.58■□□□□ 0.4
AP4B1Q9Y6B7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP4B1Q9Y6B7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AP4B1Q9Y6B7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP4B1Q9Y6B7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.58■□□□□ 0.4
AP4B1Q9Y6B7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP4B1Q9Y6B7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.58■□□□□ 0.4
AP4B1Q9Y6B7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
AP4B1Q9Y6B7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.57■□□□□ 0.4
AP4B1Q9Y6B7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4B1Q9Y6B7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
AP4B1Q9Y6B7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4B1Q9Y6B7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.57■□□□□ 0.4
AP4B1Q9Y6B7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4B1Q9Y6B7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP4B1Q9Y6B7 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.57■□□□□ 0.4
AP4B1Q9Y6B7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.57■□□□□ 0.4
AP4B1Q9Y6B7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4B1Q9Y6B7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP4B1Q9Y6B7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4B1Q9Y6B7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4B1Q9Y6B7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP4B1Q9Y6B7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4B1Q9Y6B7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.57■□□□□ 0.4
AP4B1Q9Y6B7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
AP4B1Q9Y6B7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4B1Q9Y6B7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.57■□□□□ 0.4
AP4B1Q9Y6B7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
AP4B1Q9Y6B7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4B1Q9Y6B7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.57■□□□□ 0.4
AP4B1Q9Y6B7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4B1Q9Y6B7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.57■□□□□ 0.4
AP4B1Q9Y6B7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4B1Q9Y6B7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP4B1Q9Y6B7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4B1Q9Y6B7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP4B1Q9Y6B7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
AP4B1Q9Y6B7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP4B1Q9Y6B7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP4B1Q9Y6B7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP4B1Q9Y6B7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP4B1Q9Y6B7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
AP4B1Q9Y6B7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP4B1Q9Y6B7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.56■□□□□ 0.4
AP4B1Q9Y6B7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP4B1Q9Y6B7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP4B1Q9Y6B7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP4B1Q9Y6B7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP4B1Q9Y6B7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
AP4B1Q9Y6B7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP4B1Q9Y6B7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
AP4B1Q9Y6B7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.56■□□□□ 0.4
AP4B1Q9Y6B7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.56■□□□□ 0.4
AP4B1Q9Y6B7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.56■□□□□ 0.4
AP4B1Q9Y6B7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.56■□□□□ 0.4
AP4B1Q9Y6B7 AC113410.3-201ENST00000623366 203 ntBASIC17.56■□□□□ 0.4
AP4B1Q9Y6B7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.56■□□□□ 0.4
AP4B1Q9Y6B7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
AP4B1Q9Y6B7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP4B1Q9Y6B7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.56■□□□□ 0.4
AP4B1Q9Y6B7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP4B1Q9Y6B7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.56■□□□□ 0.4
AP4B1Q9Y6B7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP4B1Q9Y6B7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP4B1Q9Y6B7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.55■□□□□ 0.4
AP4B1Q9Y6B7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP4B1Q9Y6B7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP4B1Q9Y6B7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.55■□□□□ 0.4
AP4B1Q9Y6B7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.55■□□□□ 0.4
AP4B1Q9Y6B7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.55■□□□□ 0.4
AP4B1Q9Y6B7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP4B1Q9Y6B7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.55■□□□□ 0.4
AP4B1Q9Y6B7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.55■□□□□ 0.4
AP4B1Q9Y6B7 MIR4497-201ENST00000583208 89 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms