Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PCDHB11Q9Y5F2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB11Q9Y5F2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB11Q9Y5F2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB11Q9Y5F2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB11Q9Y5F2 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB11Q9Y5F2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB11Q9Y5F2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHB11Q9Y5F2 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
PCDHB11Q9Y5F2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB11Q9Y5F2 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB11Q9Y5F2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 AC024243.1-201ENST00000609234 778 ntBASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 AC007613.1-201ENST00000572811 2597 ntBASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB11Q9Y5F2 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 AL390961.4-201ENST00000623958 2535 ntBASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 BX276092.5-203ENST00000456199 560 ntBASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 AC104390.1-201ENST00000555663 520 ntBASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 AC092119.3-201ENST00000612618 583 ntBASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 AC012313.10-201ENST00000623509 926 ntBASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PCDHB11Q9Y5F2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHB11Q9Y5F2 KRT8P50-201ENST00000562022 1438 ntBASIC17.89■□□□□ 0.46
PCDHB11Q9Y5F2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.46
PCDHB11Q9Y5F2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHB11Q9Y5F2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB11Q9Y5F2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB11Q9Y5F2 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB11Q9Y5F2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB11Q9Y5F2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB11Q9Y5F2 HBZP1-201ENST00000354915 429 ntBASIC17.89■□□□□ 0.45
PCDHB11Q9Y5F2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB11Q9Y5F2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHB11Q9Y5F2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.89■□□□□ 0.45
PCDHB11Q9Y5F2 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHB11Q9Y5F2 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms