Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 AC093525.10-201ENST00000625130 1569 ntBASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 AL391005.1-201ENST00000623953 2435 ntBASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 AC005363.2-201ENST00000618631 242 ntBASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00474Q9P2X8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 MIR564-202ENST00000385049 94 ntBASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 MIR3180-4-201ENST00000582223 153 ntBASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 AC133561.5-201ENST00000635547 218 ntBASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 GPAT2P1-201ENST00000444924 1672 ntBASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 AC006333.2-201ENST00000607957 2099 ntBASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms